Gene Mbur_1380 details

Gene Information

• Locus tag: Mbur_1380
• ID: 3997069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: -
• Start bp: 1470900
• End bp: 1471490
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637959143
• Product: electron transport complex, RnfABCDGE type, A subunit
• Protein accession: YP_566045
• Protein GI: 91773353
• COG category: [C] Energy production and conversion
• COG ID: [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
• TIGRFAM ID: [TIGR01943] electron transport complex, RnfABCDGE type, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000000000100716
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCTG ATGTAAGTCT TTTCCAGATA TTCATGGATG GTGTGTTCAT CAAGAACTTC 
CTCATCATCC AGTTCCTTGG TCTGTGTTCC TTTGTAGGTG TAACCAAGGA TACAAAGAGT 
GCTGCGGGAA TGTCCGGAGC TGTCATTTTC GTAATGACAC TGGCAGCTAC CGTGTCCTTC 
CTCATCTATA ACTTTGTACT TGTTCCACTA AAGCTAGAGT TCCTTGATCT TATTAGCTTC 
ATTGTGGTAA TTGCAGCACT TGTGCAGCTT GTAGAGTTCG TTGTAAGGAA GAATGTGCCA 
TCACTCTATC GTTCACTTGG TATCTACCTG CCTCTCATTA CGACAAATTG TGCAGTTCTC 
GGTGTAGTAT TGCTCAATGT TCTGAATGAA TATTCTTTCA TACAGAGTGT CGTTTTCGGT 
GTTTCAGCAG GTATTGGTTA TGCACTGGTA ATGTTGATGA TGTCCGGCAT CAGGGAAAGA 
ACGACCCTTG TGAACGTTCC GTCATCAATG CGTGGTTTAC CTCATGCGTT CCTTATTGCG 
ACAATGCTGT CTATGGCGTT TGTTAACTAC TTTGGAGTGA TCCCCTTATG A 

 

Protein sequence

MAADVSLFQI FMDGVFIKNF LIIQFLGLCS FVGVTKDTKS AAGMSGAVIF VMTLAATVSF 
LIYNFVLVPL KLEFLDLISF IVVIAALVQL VEFVVRKNVP SLYRSLGIYL PLITTNCAVL 
GVVLLNVLNE YSFIQSVVFG VSAGIGYALV MLMMSGIRER TTLVNVPSSM RGLPHAFLIA 
TMLSMAFVNY FGVIPL