Gene Mbur_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1264 
Symbol 
ID3998289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1354912 
End bp1356597 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content41% 
IMG OID637959030 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_565935 
Protein GI91773243 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATATG ATGCGGTAAA GCACATCGAA TGCATCTACA ACGTATTGAC CAGTGATATT 
TTAGATCACT TAAAGGTCGG TGTGGCTGTA TTAGATAGTG ATTTGAAGGT GAAATGGGCA
AATCACTTCT TGATGCATGA GCTATGTGGA CAGATAAACC ATGTTGTGGG GGTAGAAATA
TCTCAGATAC TTTCTTCTAT CTCTAATTCC TCTGAATGTT TTCGTCATTT CGATGTGACT
GACCAACTTT GCAATGGCGA AAGGGTCGTT CTACATACTC CTCTCAAAAA CGGTGTTGGC
CATAGGTGGC TGGAACACCG ATTGTCTCCT ATTAGTTCTG ATATTTATAA TGAAGGCTGG
ATAGGCTACT TTTATGATAT CACTGACCAG ATGAAGTCCA AAGACTCTCT ATCTTTGTTT
GGGGACCACG GCTATATTTC TTTTGATAAT GCCCTTTGTG AGCGTTCTGA GCGTTATCTT
CTAAGTCCTT CAGAATCGAT TAAAAAATAT ACGGATCTTC TCCTTGATGG TGAGGTAAAT
GAGGAACGAA TACATGCGAT CGAAGAGATA CAAGCAAATG CTGAAAAACT GAATGGTCTT
GTTCGGTCAG CCACCATGTA TATGGGCAAG ACCGAATTCA AATTCAAGAC CCTTTTCGAG
AATACAAGTG ATCCAATGGT CATCTTTGAT CTCGATGGGA AGATATGGGA GATAAACCAG
GTTGCATGTG ATGTGCTAGG TTATTCGTAC TTTGAGTTGC TTGGTATGGA CCACTCTATG
ATCTATGATG GTGGTTCCCT TACAGAAACG ATCAATATTC TGAAAGATTC CGAGAAGAAA
CCTTCTATTC TTTTAGAATC TTTCTGCAAT ACAAGGGATG GGGTGTGCAT TCCAGTTGAG
CTTAATTGCA GGCTTATTGA TTATGAAGAA AAGCCCGTTG TCCTTATTAC TTCCAGGGAT
ATGTCTGAAA GAAAGCACAT TGAACATCTC TCACGTACGA ATAAAGAGCT GAAATGCCTC
CATGATACTA AGGATGTGTT CGTTGATATT TTACGCCATG ATCTGATGAA TCCTGCTGGA
GTTGTCAAAG GTTATTCTGA GCTCTTGTCC AAACAGGTGG AGGGTTCGAT GATGGAAAAA
TATGTGCGAA TGATCCGCAA GAACAACAAT AAGATAATCG ATCTCATTGA ATCGGCATCT
AAATATGCAA AGCTGGAGTC GATCGAAGAT ATTGTTTTTG AGAGGCTCGA TCTTATTCCC
ATTCTGAAGA ATGTAATTGA GGATTTTGAG CCCCATTCCA GCAAGAAGTC GATAGACGTC
TCGATAGCTG TTAGTGGGGA ATGGCATGTT TATGCGAATC CAATGGTTGA CACGGTGTTC
GCCAACTATC TTTCGAATGC GATAAAGTAT AGTCCTGAAG GGTCTAAAGT AGAGTTCGAT
GTCGATGATC TCGGTGATAT GTGTAAAGTG CTCGTCAAGG ACAATGGAAT TGGGGTTCTT
GATGAGGACA AACCGTTTGT TTTTGAAAGG TTCACCAGAC TTAATTCCGT TCATATCAAA
GGTGCGGGAC TGGGGCTTGC AATTGTTAAG AGGATAGCTG AACTTCATAA CGGTCAGGTG
GGTGTAGATG ACAATCCTGA TGGAAAAGGT TGTGCCTTTT GGGTTATTTT GAAGAAATCC
AGGTAA
 
Protein sequence
MEYDAVKHIE CIYNVLTSDI LDHLKVGVAV LDSDLKVKWA NHFLMHELCG QINHVVGVEI 
SQILSSISNS SECFRHFDVT DQLCNGERVV LHTPLKNGVG HRWLEHRLSP ISSDIYNEGW
IGYFYDITDQ MKSKDSLSLF GDHGYISFDN ALCERSERYL LSPSESIKKY TDLLLDGEVN
EERIHAIEEI QANAEKLNGL VRSATMYMGK TEFKFKTLFE NTSDPMVIFD LDGKIWEINQ
VACDVLGYSY FELLGMDHSM IYDGGSLTET INILKDSEKK PSILLESFCN TRDGVCIPVE
LNCRLIDYEE KPVVLITSRD MSERKHIEHL SRTNKELKCL HDTKDVFVDI LRHDLMNPAG
VVKGYSELLS KQVEGSMMEK YVRMIRKNNN KIIDLIESAS KYAKLESIED IVFERLDLIP
ILKNVIEDFE PHSSKKSIDV SIAVSGEWHV YANPMVDTVF ANYLSNAIKY SPEGSKVEFD
VDDLGDMCKV LVKDNGIGVL DEDKPFVFER FTRLNSVHIK GAGLGLAIVK RIAELHNGQV
GVDDNPDGKG CAFWVILKKS R