| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1196 |
|---|
| Symbol | |
|---|
| ID | 3998352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1284595 |
|---|
| End bp | 1285602 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637958963 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_565869 |
|---|
| Protein GI | 91773177 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.213914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACAACTG TTCTCGGTAT AGAAGGCACA GCCTGGAATT TAAGCGCAGC AATTGTTGAC
GAAGATGATG TTATCGCAGA GGTGACTGAG ACATATCGGC CAAAAACCGG AGGTATTCAT
CCAAGGGAAG CTGCGCAACA TCATGCTTTG CATGCATCCG ATGTTATTGA AAGATTGCTG
AAGGAATATA GGGATAAGGG TCATTCCCCT GAAAATATCG ATGCTATTGC GTTTTCGCAG
GGCCCGGGTT TGGGGGCATG TCTGAGGACG GTCGCGACAT CTGCAAGGGC ACTGGCATTG
TCGCTGGATA TTCCGCTTGT GGGTGTGAAC CACTGTATCG GACATGTTGA GATAGGACGC
TGGAAAACAC CGGCAGTTGA TCCTGTGGTG CTGTATGTCA GTGGTGGGAA CTCGCAGGTG
CTTGCTCACA GGGCTGGAAA GTATAGGATA TTCGGGGAAA CCCTTGATAT CGGCATAGGG
AATGCCCTTG ATAAATTTGC AAGGGGTGCA GGGCTGACCC ATCCCGGTGG TCCCAAGGTG
GAAGAGTATG CCAGAAAAGC TACGAATTAT GTGAAAATGC CATATGTTGT AAAGGGTATG
GATTTCTCAT TTTCAGGGCT ATCCACGGCT GCCACAGATG CGCTGAAGGA CAATTCCCTT
GAAGATGTCT GTTATTCTTT CCAGGAGAAT GCTTTTGCAA TGCTTGTGGA GGTTACGGAG
CGTGCACTGG CCCATACAGG TAAGAGCGAA GTGCTTCTTG CAGGAGGGGT GGGTGCGAAC
ATGCGACTTC GTGAAATGCT TGATCTCATG TGTGAGGACA GAGGTGCGAG CTTCTATGTG
CCTGAAAGAC GTTTCATGGG TGACAATGGT GCCATGATAG CTTATACAGG TCTGTTGATG
TTCAATTCAG GGACCACTTT ACCGATTGAA AATTCTCATG TGGACCCGAG CTTCAGGCCG
GATACTGTCG ATGTGACCTG GATAGCTGAT GAAAAGGAGG TTCTGTGA
|
|---|
| Protein sequence | MTTVLGIEGT AWNLSAAIVD EDDVIAEVTE TYRPKTGGIH PREAAQHHAL HASDVIERLL
KEYRDKGHSP ENIDAIAFSQ GPGLGACLRT VATSARALAL SLDIPLVGVN HCIGHVEIGR
WKTPAVDPVV LYVSGGNSQV LAHRAGKYRI FGETLDIGIG NALDKFARGA GLTHPGGPKV
EEYARKATNY VKMPYVVKGM DFSFSGLSTA ATDALKDNSL EDVCYSFQEN AFAMLVEVTE
RALAHTGKSE VLLAGGVGAN MRLREMLDLM CEDRGASFYV PERRFMGDNG AMIAYTGLLM
FNSGTTLPIE NSHVDPSFRP DTVDVTWIAD EKEVL
|
|---|
| |