| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0252 |
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| Symbol | |
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| ID | 3998747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | - |
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| Start bp | 226742 |
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| End bp | 227728 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637958087 |
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| Product | type II secretion system protein |
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| Protein accession | YP_565009 |
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| Protein GI | 91772317 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.163074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTCA ATAAAAAGAC CGGAAGAAAT GTTGTTGAAA TTGATGAACT TGATGAGGAA
CAGCTCACTA CTTATGAGAA ACAGATTATT CTAATGAAGC TTGATGATAT CAAGAAAAAT
GATCGTTTAA GAGATTTTAT GAAGGATCCA AAAGGTTCCT TTTCAACATA TCCTTATTAT
GCTATGGCCT TCAGTGGACC GGCAGCAATT ATATTCATGA TCGCGGGTTT GTACCTGACT
TGGGGGACAC CCGGCATTGA TAATGTTCTT ATTTTCTCAA GCTGGATATT TATTCTTCCT
CCTGCATTGA CATTTTATCG TAAAGCAAGA TACATCAACA AGGTCGAGGA ATATCTTCCG
AACTTTCTTC GTGATATTGC AGAAATGAGC AGGGCAGGTC TCACCCTTCC GGCTTCTGTA
GAAACTGTCG CAAAAGGTGA ATATGGTGAA ATGACCAAAG AGATCCGCAT GATGGATGCT
TCTCTTTCAT GGGGTATCTC CTTTGAGGAT ACGCTTGAGA ATTTCGGAAA AAGGATGAAC
ACTCACCTCA TTACCAGGTC AGTAGCACTT ATTACTCAGG CAAATCGGGC AGGTGGTCGT
GTTTCTTTTG TCCTCGAGGC TGCTGCAAGG GATGCGAGTG AGATAAAGAC CCTTGAAAGA
GAGCGCCGCG GCAATATGGC TGTTTATGTT GTGATCAGTT ACATGTCATT CTTTGTATTC
ATTTTTGTGA TATTGATGCT GGCTACAAGG TTCGTTCCCA CTATGCATAT GGCAAGTGTG
GCTTCATCTT CATCACCTGC AGGTGGTTCT TTCATAGGCA GTTTCGATGC TGATAATTTC
ATACGCATAC TTTTCCATGC GACTATCATC CAGGGTTATA TGAGTGGCCT TGTTGCAGGA
CAGATGGGGG AAGGCAGGTT GAGTGCCGGG TTGAAACACT CTTTCGCCCT GACATTAATT
GCATGGCTTT CATTCATAGT GCTTTAA
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| Protein sequence | MKFNKKTGRN VVEIDELDEE QLTTYEKQII LMKLDDIKKN DRLRDFMKDP KGSFSTYPYY
AMAFSGPAAI IFMIAGLYLT WGTPGIDNVL IFSSWIFILP PALTFYRKAR YINKVEEYLP
NFLRDIAEMS RAGLTLPASV ETVAKGEYGE MTKEIRMMDA SLSWGISFED TLENFGKRMN
THLITRSVAL ITQANRAGGR VSFVLEAAAR DASEIKTLER ERRGNMAVYV VISYMSFFVF
IFVILMLATR FVPTMHMASV ASSSSPAGGS FIGSFDADNF IRILFHATII QGYMSGLVAG
QMGEGRLSAG LKHSFALTLI AWLSFIVL
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