| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0198 |
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| Symbol | |
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| ID | 3997165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 180357 |
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| End bp | 181148 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637958035 |
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| Product | exosome complex RNA-binding protein Rrp4 |
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| Protein accession | YP_564958 |
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| Protein GI | 91772266 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000947081 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTA AAATCGTAAT CCCCGGGCAA TTACTTTCTG AGAAGAAAGA AATGGCCGGG
CCAGGTACTT ATGTTAAAAA TGGAAATATC TATTCTTTAC TTTATGGAAT TGCAAATTTC
AAGGGAAGGG TTTCAGTAGT ACCTTTTTCA GGAAAATATA TTCCCTCACG TAAGGATTTC
ATTATTGTGA ATGTCATTGA TGTCACTCCT TCCAACTGGA TAATGGAAAC CGGTTCTCCG
TATGATGGTC TTCTTCATGT ATCCGAATTT CCTAAACGTG TCGATTCTTC TGAAATGAGG
AAGTTCATGG ATGTCGGGGA TTGTGTCATT GTTCGTGTGA AGGATGTTAG CAAGGCTATG
AAAGTAGAGC TTTCAATGCG TGAGCAGGGC TCAAGAGCAT TAAGTAAAGG TCGTATCATT
GAAGTTGTGC CTTCAAAGGT ACCACGTGTC ATCGGACATG GTGGGTCAAT GGTATCAATT
CTTAAGAAAG AGTCGAATTG TGATGTGTTC GTAGGAAAGA ACGGCCGTAT CTGGATAAAT
GGTAAGGATA AAGATATGGA CCGTCTTACG ACAGCGATCG AAATGATAGA AAGTGAATCT
CATATGTCCG GTTTAACGGA TAAGGTCGGC ATGTTTTTGA GGGGTGAACC GGAAGGGACC
GAGGGTTCCG ATGAAGAACA GCTAGTAGAT GAAGAAGTTG CTGGTGTGTC CCTTGAAGAT
GATGACGTTA CCGAAGAGAC CAGCCGTAAG GTCGATGTCT TGCTGGACAA TGATACCGAT
GAGACTAATT AA
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| Protein sequence | MDRKIVIPGQ LLSEKKEMAG PGTYVKNGNI YSLLYGIANF KGRVSVVPFS GKYIPSRKDF
IIVNVIDVTP SNWIMETGSP YDGLLHVSEF PKRVDSSEMR KFMDVGDCVI VRVKDVSKAM
KVELSMREQG SRALSKGRII EVVPSKVPRV IGHGGSMVSI LKKESNCDVF VGKNGRIWIN
GKDKDMDRLT TAIEMIESES HMSGLTDKVG MFLRGEPEGT EGSDEEQLVD EEVAGVSLED
DDVTEETSRK VDVLLDNDTD ETN
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