Gene Mbur_0036 details

Gene Information

• Locus tag: Mbur_0036
• Symbol: rps13p
• ID: 3996900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 25003
• End bp: 25449
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637957879
• Product: 30S ribosomal protein S13P
• Protein accession: YP_564810
• Protein GI: 91772118
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0099] Ribosomal protein S13
• TIGRFAM ID: [TIGR03629] archaeal ribosomal protein S13P

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGATG AAGAAATAAG ACATCTGGTT CGTATAATGA ATACTGATCT GCAGGGCAAA 
AAGCCAGTGA AGTATGCATT GACCGGTATA CGTGGTATCG GATTACGAAC CTCTCGTGTT 
ATCGTTGACA GTACAGGTAT CGACCCAAAC GCAGTGATCG GTTACCTTTC TGACGAAGAT 
ATTAAAAAAC TGGATTCAAC TATTGATAAG TTCGAAGAGC AACTTCCGAA ATGGATGCTC 
AACAGACAGT TTGACCCTTT AACAGGGGAA AACAAGCACC TTCTTGGTCA GGACATCATT 
CTGACACTTA AAGAAGATCT TAACGACCTC AAGAAATCAC GTGCATACCG TGGTCTCAGA 
CATGAGAGAG GTCTCAAGGT CAGAGGACAG AGAACCAAAT CCACCGGCAG GCGTGGAAGC 
ACCATTGGTG TCAGGAAGAA GAAATGA 

 

Protein sequence

MADEEIRHLV RIMNTDLQGK KPVKYALTGI RGIGLRTSRV IVDSTGIDPN AVIGYLSDED 
IKKLDSTIDK FEEQLPKWML NRQFDPLTGE NKHLLGQDII LTLKEDLNDL KKSRAYRGLR 
HERGLKVRGQ RTKSTGRRGS TIGVRKKK