Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2447 |
Symbol | |
ID | 5412007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2528073 |
End bp | 2528642 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869704 |
Product | LemA family protein |
Protein accession | YP_001405604 |
Protein GI | 154151986 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.977457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGACG ATATCATCAG CTGGATTATA CTCATCATTA TCATCGTAGT CGTCATCGGC CTTGTCCTCT GGGCCGTGGG CATCTACAAC CGCTTCCAAT CCCTGAAAAA CTCATCCGAA GCAACGCTCG GGCAGATCCG GGTTGCGATG AAGAAGAGGC TTGACATGAT CGAGCAGCTG CTCGGCGCAG TCAAGAGCTA TGCAAAGTTC GAGCAGGACA CGCTTACAAA AGTCACCGCC ATGCGGTCTG CGGTTGCGAC CGCAGGACCC GGCGACCTCA ACAAGGTTGA GGCCGAGTCC CGCTCGATCT TTGGCAGGCT GCTTGCCGTG GCAGAGAACT ACCCCGACCT CAAGACCGCA AGCACGGTCA CCAGCCTCAT GAGCTCGGTA AAAGACCTCG AAAACGAGAT CTCCCGCCAG CGGTACACCT ACAACAACAT CTCGCAGGAG TTCAACACCA TGATGGACAC GATCCCCTCT AAGTTCATCG GCCACATGAC GGGCATGCCC AAGCTCGAAT ACCTCCAGTT CGAGGAAGAG ATCAAGACTG CGCCGAAGAT TGAGTTCTAA
|
Protein sequence | MLDDIISWII LIIIIVVVIG LVLWAVGIYN RFQSLKNSSE ATLGQIRVAM KKRLDMIEQL LGAVKSYAKF EQDTLTKVTA MRSAVATAGP GDLNKVEAES RSIFGRLLAV AENYPDLKTA STVTSLMSSV KDLENEISRQ RYTYNNISQE FNTMMDTIPS KFIGHMTGMP KLEYLQFEEE IKTAPKIEF
|
| |