Gene Mboo_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2447 
Symbol 
ID5412007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2528073 
End bp2528642 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID640869704 
ProductLemA family protein 
Protein accessionYP_001405604 
Protein GI154151986 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.977457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACG ATATCATCAG CTGGATTATA CTCATCATTA TCATCGTAGT CGTCATCGGC 
CTTGTCCTCT GGGCCGTGGG CATCTACAAC CGCTTCCAAT CCCTGAAAAA CTCATCCGAA
GCAACGCTCG GGCAGATCCG GGTTGCGATG AAGAAGAGGC TTGACATGAT CGAGCAGCTG
CTCGGCGCAG TCAAGAGCTA TGCAAAGTTC GAGCAGGACA CGCTTACAAA AGTCACCGCC
ATGCGGTCTG CGGTTGCGAC CGCAGGACCC GGCGACCTCA ACAAGGTTGA GGCCGAGTCC
CGCTCGATCT TTGGCAGGCT GCTTGCCGTG GCAGAGAACT ACCCCGACCT CAAGACCGCA
AGCACGGTCA CCAGCCTCAT GAGCTCGGTA AAAGACCTCG AAAACGAGAT CTCCCGCCAG
CGGTACACCT ACAACAACAT CTCGCAGGAG TTCAACACCA TGATGGACAC GATCCCCTCT
AAGTTCATCG GCCACATGAC GGGCATGCCC AAGCTCGAAT ACCTCCAGTT CGAGGAAGAG
ATCAAGACTG CGCCGAAGAT TGAGTTCTAA
 
Protein sequence
MLDDIISWII LIIIIVVVIG LVLWAVGIYN RFQSLKNSSE ATLGQIRVAM KKRLDMIEQL 
LGAVKSYAKF EQDTLTKVTA MRSAVATAGP GDLNKVEAES RSIFGRLLAV AENYPDLKTA
STVTSLMSSV KDLENEISRQ RYTYNNISQE FNTMMDTIPS KFIGHMTGMP KLEYLQFEEE
IKTAPKIEF