| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2418 |
|---|
| Symbol | |
|---|
| ID | 5410494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2487216 |
|---|
| End bp | 2490038 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640869675 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstA |
|---|
| Protein accession | YP_001405575 |
|---|
| Protein GI | 154151957 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.420057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTT ACCGCCGGGA GTTCACGGAT AAAATCATCG TCATCCTTTG TCTTTGTGCC
TCACTTGTAG TCGTTGCAAT GCTCTTTTGG ATTATCACAA TGTTATTCGT CTCAGGTCTG
CCGTCTTTTT CGTGGTATTT TATAACAACT CCCGAAAATG CAGCTGGCGG GATGGGGAAT
GGTATCGCAA ATGCGATTGT CGGAACGATC CTGATCTCTC TATCAGCAAC CATCATTGCT
GCACCCTTTG GCCTTGGAAC CGCTATCTAC ATGAGGCGGT ATGCAGAGGA TAACGGTATC
ACTCAGGCGT TCCGGTTTCT CCTAGAAGTA CTTTCAGGAA CCCCATCCAT CGTTATCGGC
ATTTTCGGGT TTCTGATCTT TGTTATTTAC ATGAAACAGA TCTTGGGTGG ATTTTCCCTG
ATCGCAGGAG CGGTCGCACT GGCAATCCTG ATCATGCCGG TCATCGAACG GGCAACTGAG
GATGCAATCG ACAGGGTTCC CCCGGATCTG GAAGAGGGAA GTTACGCGCT CGGGGCCAGC
AAATGGCAGA CTATCAGCGG AATTACTATC CCGACCGCAT TCAGCGGGAT TCTGACAGGA
TTTACGCTTG GATTTGGCCG CGCCGCAGAG GAGTCTGCCG TGGTGATCCT CACTGCCGGT
TACACCCAAT ACATGCCGGA GTTTGGAATC CTTTCGACAA CGGGTTCTCA GGGAGGGGTA
AAAGTTTACC CCTTTCAGGA TATGGTAGCA ACCCTCCCCT ATACCGTCTA TCACTCTTTC
CAGAATCCAA GCCTAGTCAA ACCGTCAGCA GGATTTGCTG CGGCATTTGT CCTCGTTGTC
ATCGTCTTTT CCATCAACAT CGCGGGAAAA GCCTTCCTCA GTTATGGTTT TGGAGGGTGC
AGAACAAATG ATCCCTCTGT TTTTGATGCT TTGAAAAAGA GGTTATTCCC ATCACCGACA
GCCAGCTCGA CGCCGATCAG TGCAGGAAAA CCACAGGATA TCCCCCTCCC AGGGAAAAAG
AGTAACTTCG CAGAGACCTT AAAAGTCGGC GTTGGACAGA TCCATTCGGC ACACGCTGAT
TCTGAAATGA AAAAATCCGG CGAACCGGTA ATCGTCTCCC TGACCGCCCC GGCCATTTCT
CTCGGCCCGC CGGAACGCGT TGAGCCGGAA CCTGCCCCGG CATTGGATAA GGCCCAAATT
AGTAAAGCTA TCTCATTTTA CGAAGAGGAT ACTCCTCCCG GAGTTCCCCG GAAGCCGGAT
TCCCATACGA AGTTGCAGTG GCGTCTGCGC AATCCCATTT CATCCATACG TACAAGGATC
CGTACCTGGC TCCAGTCAGT CCACCTCAGG CGGAGCAAAA CCGCCTCTTC CCCGCAACCA
GAATCCGTGG CCTCCCCTGT CGTACCTCAA AAAGAAAAAA CAAAATCCCG GTTTAACCTC
CGCGATTTCC TCCGGCCATT CCTCTTCACC CTGATCCCTT TCATTCTCGT AGCCGGGCTC
CTCATAGTTC TTGCCGCGGT GATCCCGACA CTGAGCCCGC CCGGGACCGG AGGGGTACTG
GATTTTGTCA AGTCAATTGT CATTGCAATC GTAATCTGTG CCATCTGCGC AATCATTGCC
CTCTTCCTGC TCCGGAGAAG CGCCCAGATC CTCAAGATGC GGAAAAAAAA TCCCCTTCTT
GGGAACCGGA CGGGTGCGAT TATCGCCGTC ATTGTTGGGA TCTGCCTGGT ACTTGTTGGT
GCATTCATCC TCTCTGCCCA TCTCTTTGTC CCTCCGGTCA CCACTGTATC TGCTGCGCAG
GAAGCCGGTA CATCTTCAGC AGGAGTGATA AATACCCCCA TATTCTCATT CAACCTCCAG
CCGCAGGATC TTATCCTGCT GCAAAAAATG AATAATCCGG CCTTTTCCAT TAACCTGCAG
GACGGAGACC TCCAGATCAG GATCATAAAT CAGACCATTA CTTCGATGAA CATGAGCCTG
CCAGCCACCG CCGGAGGTAC TGACAGCATC CTAGCAGCCG GAACCGGAAC AACTCAAGAC
AAGAGTGCCC GCCTTGCTGC GTTCCTTGCC CAACAGAATG CCGGGGAAGA AAACTCCGTA
TCCTCCACAG CAACGGCCAC CCCTTCACCG ACAGTAACGC TAACCCCGGC ACCGGCAGCC
GCAGCAGCAC AGAATCAGGC AGTCACAGGT AAGTATGCCC TCGATCTCGG CGAATCCTAC
TGGTACGGCG ACAACAGCCG CCCGTGCCTT GCCACAGTGT ATAACACAAG TGTCCTTCCC
TTTTACTTCT GGTGGGATAT GAGCTGGAAC CGGTTTGTCC AGCAGACCCC GGCGCAGACC
GGCGATGTGT TCCTGGTCAT CTTCATCCGG ATAGAGGATA CAGGGAATAT GAGTGCCCTG
GTTCCCTCGG CCGACTCGTT TGTGGTGGTC AACAACGGCC AGACCTATAC CCACAACCCC
TACTTCGACA CCTCTGTCCT CACTCAGAAC GAGATCAACT ATTATTCAGT GCACTATGAC
CAGCTGCCGT ACCAGTGGAT CCGCGAGATC GGAAACCAGA AGCGGGACTA TGCCTTCCTG
ACCGGTTTCA ACGTCTTTGG GGAGAATACC ACCGCGATCA CAACCTTTAC CACAAATGCT
CCCCCCAGCC CCGGTTTCGA TACCAACGGC CAGGGGTATT TCATCATGCC CGGACGGAGC
AATGCCATCG ACGGGTACCT GATCTACGAA GTCCCGTCAT CAGTCGCAGC GGATCTCAAG
GATACCTATG TCCAGGTCTC CTTCAACAGT TTCAGCCCGG CACAATGGAG ATTATCCAAA
TAA
|
|---|
| Protein sequence | MTSYRREFTD KIIVILCLCA SLVVVAMLFW IITMLFVSGL PSFSWYFITT PENAAGGMGN
GIANAIVGTI LISLSATIIA APFGLGTAIY MRRYAEDNGI TQAFRFLLEV LSGTPSIVIG
IFGFLIFVIY MKQILGGFSL IAGAVALAIL IMPVIERATE DAIDRVPPDL EEGSYALGAS
KWQTISGITI PTAFSGILTG FTLGFGRAAE ESAVVILTAG YTQYMPEFGI LSTTGSQGGV
KVYPFQDMVA TLPYTVYHSF QNPSLVKPSA GFAAAFVLVV IVFSINIAGK AFLSYGFGGC
RTNDPSVFDA LKKRLFPSPT ASSTPISAGK PQDIPLPGKK SNFAETLKVG VGQIHSAHAD
SEMKKSGEPV IVSLTAPAIS LGPPERVEPE PAPALDKAQI SKAISFYEED TPPGVPRKPD
SHTKLQWRLR NPISSIRTRI RTWLQSVHLR RSKTASSPQP ESVASPVVPQ KEKTKSRFNL
RDFLRPFLFT LIPFILVAGL LIVLAAVIPT LSPPGTGGVL DFVKSIVIAI VICAICAIIA
LFLLRRSAQI LKMRKKNPLL GNRTGAIIAV IVGICLVLVG AFILSAHLFV PPVTTVSAAQ
EAGTSSAGVI NTPIFSFNLQ PQDLILLQKM NNPAFSINLQ DGDLQIRIIN QTITSMNMSL
PATAGGTDSI LAAGTGTTQD KSARLAAFLA QQNAGEENSV SSTATATPSP TVTLTPAPAA
AAAQNQAVTG KYALDLGESY WYGDNSRPCL ATVYNTSVLP FYFWWDMSWN RFVQQTPAQT
GDVFLVIFIR IEDTGNMSAL VPSADSFVVV NNGQTYTHNP YFDTSVLTQN EINYYSVHYD
QLPYQWIREI GNQKRDYAFL TGFNVFGENT TAITTFTTNA PPSPGFDTNG QGYFIMPGRS
NAIDGYLIYE VPSSVAADLK DTYVQVSFNS FSPAQWRLSK
|
|---|
| |