| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2395 |
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| Symbol | |
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| ID | 5412118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2465164 |
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| End bp | 2466756 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640869651 |
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| Product | chaperonin Cpn60/TCP-1 |
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| Protein accession | YP_001405552 |
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| Protein GI | 154151934 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.418738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCTG GTCAACCAAT CATCATTCTC AAAGACAATG TAGACCGTAA TACCGGCAAG
GAGGCACAGC GCTCGAATAT CATGGCCGCA AAAGCGATTG CCGGAGCGGT CCGGACCACC
CTTGGCCCCC GCGGCATGGA CAAGATGCTC GTCGGATCAA CCGGCGACAT TGTTATCACC
AACGACGGTG CAACCATCCT CCAGGAGATC TCGGTCCAGC ACCCCGGTGC AAAGATGGTC
ATCGAAGTGG CAAAGACCCA GGACGACGAA GTCGGCGACG GGACCACCAC CGCGGTGGTC
ATTGCCGGCT CGCTCATGGA ACAGGCAGAG TACCTCCTGG AGCAGGGTAT TCACCCGACC
GTGATCGCAC AGGGCTACCG CCTGGGCATG GAAAAGGCAC TCGAGATCAC CGTGTCACTC
TCGCACAAGG TCGATCCCAA GGACCGGAAA ACCCTTGTAA AGATCGCTGA CACTGCGATC
ACCGGAAAGT CCATCGAATC GGTCAAGGGA AAACTCGACG GCATCATCGT TGACGCCGTG
ATGGCCATTG CAGAGAAGAC AAACGGCAAG TACCTCGCTG ATGAAGACGA TGTAATGATC
AAGAAGCAGA AGGGCCGGGC CATGGACGAT GCCGAGCTTG TCCGTGGAGT GATCCTTGAC
AAGAAACGCG TAAGCGAAGA CATGCCAAAG AAGGTCTCCG GGGCAAAGGT CGCACTTATC
GCAACTCCTT TGGAAATCAC AAAAACCCAG GTGAAGGCAA AGATCAAGAT CTCAAGTGCC
GACCAGATTG CGGCCTTCTC CGAGCAGGAA CGGGCAACCT TAAAGAAACT CGCTGACGCG
ATTGTGGATT CCGGCGCAAA CGTGGTCTTC TGCCAGAAGG GTATCGCAGA CCCGGTCCAG
TTCTTCCTTG CAAAGAACGG CATCTATGCA GTTGAGGACG TCCCCGAAAA AGACCTCAAG
TACGCTGCCC GGGCACTCGG TGCAAATATC GTGAACAAGC CCGACGACCT GACCGCAAAG
GATCTCGGCC ATGCAGAGGT TGTCGAAGAG GACAACGATA TCGATGTCAC CAGGATCTCA
GGCTGCAAGA ACCCCAAGAC GATCACCATC CTGCTGAGGG GTACAAGCGA CTACCTGCTC
GACGAGCTCG AGCGTGCAGT GGTTGACGGA ACCCGCGTTG TTATGGACGC GATCGAGGAC
GGAACCTTTG TCGTTGGTGG CGGTGCAGTC GAGACCGAAC TTCTCATGAA AATCCGGGAG
TACGCCGAAA CCGTCGGGGG CCGGGTCCAG CTGGCAATCG AAGGGTATGC AAAGGCATTC
GAGACAATCC CCCGCACCCT TGCAGAGAAC TCAGGCTACA ACCCCATTGA CAAGCTCGTT
GCACTCAAGA ACGCCCATGC AAAGGGCAAG AAGAGTGCAG GACTCAATGT CTATACCGGG
GAAATCGTGG ATATGGCAGC GGAAGGCGTC ATCGAACCGC TCCGGTCAAA GCGCCAGTCT
ATTGAGAGTG CATCCGAAAC GGCCATCATG CTGATCCGCG TGGACGACAT GATGATCACC
CAGAACAAGC CGGCTATGCC CCCCATGGCA TAG
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| Protein sequence | MLSGQPIIIL KDNVDRNTGK EAQRSNIMAA KAIAGAVRTT LGPRGMDKML VGSTGDIVIT
NDGATILQEI SVQHPGAKMV IEVAKTQDDE VGDGTTTAVV IAGSLMEQAE YLLEQGIHPT
VIAQGYRLGM EKALEITVSL SHKVDPKDRK TLVKIADTAI TGKSIESVKG KLDGIIVDAV
MAIAEKTNGK YLADEDDVMI KKQKGRAMDD AELVRGVILD KKRVSEDMPK KVSGAKVALI
ATPLEITKTQ VKAKIKISSA DQIAAFSEQE RATLKKLADA IVDSGANVVF CQKGIADPVQ
FFLAKNGIYA VEDVPEKDLK YAARALGANI VNKPDDLTAK DLGHAEVVEE DNDIDVTRIS
GCKNPKTITI LLRGTSDYLL DELERAVVDG TRVVMDAIED GTFVVGGGAV ETELLMKIRE
YAETVGGRVQ LAIEGYAKAF ETIPRTLAEN SGYNPIDKLV ALKNAHAKGK KSAGLNVYTG
EIVDMAAEGV IEPLRSKRQS IESASETAIM LIRVDDMMIT QNKPAMPPMA
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