| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2328 |
|---|
| Symbol | |
|---|
| ID | 5410523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2394572 |
|---|
| End bp | 2395495 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640869584 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001405485 |
|---|
| Protein GI | 154151867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTCA TTCTTGAAGC GGCGAAGTTT GAGGTCGAAG AGGTTGACGA ACCCCTCGAT
CTTTCGGCCG TAAGGGACGG CGAATGCGTT CTTGTACTCT GCTCAAATGA TGCGGAACTC
GTCGGGCAGT TCGACAAGAC CAACTACAGC CTCATGGTAG ACGACCACGA GATGACCTGC
AAGAAACTGC TCTTCACCCT CGAAAAGGAC ATTACGACCG AGAACTGTAC CCAGTGGGGT
GTCGGGGAGT TTGTCCAGTA CGCAGGGGAG GCGGTACTTG CCGACATCGT GGAGCAGGAA
CTCAAGCTCG ACCTCACACC GGGCAAGGCA AAGGCAAAAA AGGCGGCAGC TGCTGCAGAG
GAAGCACCGG CCGAAGACGA GCACTCCGGC ATCTCGATCC TCCACTTCCC GGTCAAGCTC
TCCGAGCAGG CCGCGATCCG GACCGCGGGA ATCCAGGGCG CGGCAAAACT CCGGTTCATG
CCCTACTACC TGATCCACTA CACAAGCAGC GGGGAGCAGG TGTACAAGGA CCGGCGCATC
CCCTTTGATG CAGACGGCTG GGGCGCGATC AATGCGATTA ACGGCATCAA GCTCGATCTT
GACGGGACCA AAGTCGAGGA CTCCGAGATC CCGGCCAATG CCGAGGTATC CGATGCGCAC
ATCACAAAAG AAGAGGCATC CGAGCGCATG GTGACCGAGC TTATCGAACG GCTCACCCAG
AAGGTCAGGA TCAAGCAGGA AAAGGGCGAC GCGATCTTCT ATGAGGAAAA GACCCTCAAG
CCCGACCGCA AGAACATTAC AATCGACACA AAACAGGTCT ACATCCCGGT CTGGCAGATC
CGGGGCAAGA AGATCGTGGA GGTCAATGCC TTCACCGGCG AGCTCCTGTC CGAGCCTATG
GACGAGGGCG TCGAGGTCTT CTAA
|
|---|
| Protein sequence | MRLILEAAKF EVEEVDEPLD LSAVRDGECV LVLCSNDAEL VGQFDKTNYS LMVDDHEMTC
KKLLFTLEKD ITTENCTQWG VGEFVQYAGE AVLADIVEQE LKLDLTPGKA KAKKAAAAAE
EAPAEDEHSG ISILHFPVKL SEQAAIRTAG IQGAAKLRFM PYYLIHYTSS GEQVYKDRRI
PFDADGWGAI NAINGIKLDL DGTKVEDSEI PANAEVSDAH ITKEEASERM VTELIERLTQ
KVRIKQEKGD AIFYEEKTLK PDRKNITIDT KQVYIPVWQI RGKKIVEVNA FTGELLSEPM
DEGVEVF
|
|---|
| |