Gene Mboo_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2327 
Symbol 
ID5410522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2393725 
End bp2394471 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID640869583 
Producthypothetical protein 
Protein accessionYP_001405484 
Protein GI154151866 
COG category[S] Function unknown 
COG ID[COG1693] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.808055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC CACTCAAGTT TGTCAATCAC AGCATTGACG ACTACGCGAT GCAGGTGACC 
TACGATCCCG CCAAGGGGAC CGGCAAGGTC GTTTACAATA TAACCCTTGT GAAAAACGAG
GACTTCGAGT ACGCAGTCTC GGTTCTCAGG GACGCGTACA AGACCGGCGT TTCTGTGAGC
GGCCTGGTAC GGTTTGCCTC TTCAAACGAG AAGATCGAGG ACTTCGTGGT ACCTGACGGG
TTTACCGCAA TCTGCACGGT CTGCAGCCTG ACCTTCGACG GCCTGTTGAT CCGGCGCGGC
ATCCCGATTA ATCCGATTGG CGGGGGCGTG GTGGAAGTCG AGGACCGTTC GCCCATCCGG
TTCACCCACA TCATCCTGTA CGAGCATACC ACCATCGACC CGCTCCAGGT GCTCATCTCC
CAGCAGATCA CTTCGGTAAA CGATGTGATG CGCAAGGGCA GCGGGAACAT CCTTGCAAAC
ATCCGGGAGT TCCATATGGA GGCAGAGCCG CTCGTGGGCC AGGTGCTTGA CGAGCTTGTG
GAGAGCAGCT TTACCGGGAT CCTTGAGGTC GGTGTGCCCA ATATCCCGCT CCTTGGCGTA
CCGGGCAGCC CGCAGTACGT CTCCATTGCT GCGGTAGGCG GCACAAACCC GATCGCCGCG
ATCCGTGAGG GCGGGCGTTT TGTCCAGACC CAGGCGCTCA AAGGTGTCAT GGATGTGGAA
AAATTCGTGG AGATCCGGGA TTACTAA
 
Protein sequence
MTGPLKFVNH SIDDYAMQVT YDPAKGTGKV VYNITLVKNE DFEYAVSVLR DAYKTGVSVS 
GLVRFASSNE KIEDFVVPDG FTAICTVCSL TFDGLLIRRG IPINPIGGGV VEVEDRSPIR
FTHIILYEHT TIDPLQVLIS QQITSVNDVM RKGSGNILAN IREFHMEAEP LVGQVLDELV
ESSFTGILEV GVPNIPLLGV PGSPQYVSIA AVGGTNPIAA IREGGRFVQT QALKGVMDVE
KFVEIRDY