Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2320 |
Symbol | |
ID | 5410515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2385352 |
End bp | 2387343 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640869576 |
Product | hypothetical protein |
Protein accession | YP_001405477 |
Protein GI | 154151859 |
COG category | [S] Function unknown |
COG ID | [COG2433] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.434022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACC GCCTGAGTGT ATTTGGGATC GATATTGTCA AAGGCTCGGT GCGTTCGCGG TCCCGCCGGC CGATGTACGC GCTCGTCAGG CTGGAAGAAA GCGAGATTGT AAGCGAAGGT ACGGTCTCAA TGTTCCGGCT CTTCCGGCTC CTCTCTGAAG AGCGGCCCGA CATCCTTGCC GTTGACAGCA TCCAGGAGAT CGCGACCGAC CAGCACGAAC TCTTCTTCTT TTTACAAGGG TTGCCCCCGC AGACAAAGCT CGTGCAGGTG ACCGGTGGCG AAAAGAAGGA GACGCTCGGG AAGGTTGCGG CCCGGTTCAA CATCAGCTTT GACCGGTTCG ACCCCTTTGC CGAGGCCCGC ACTTCGGCCC GGGTGGCAGC CCTTGGGGCC GGGGCAGAGG TCATCGCGTT CGAGAACGAA AGTGAAGTCG TAGTAAGCCG GCACCGCTCG CCCGGCCGGG GCGGGTGGAG CCAGAACCGG TACGTGAGAA AGATCCATGG CGCTGTCCAG CTCAAGGGGC GCGAGATCGA GATGCAGCTT GCCGCAACAG GGCTCCGGTA CGAGAAGAAG GAGACCAAAG CCTTTGGCGG GTGCAGCCGG GTGCTCTTCC GGGTCTTTGC CGCCCGGGGC CAGGTCCCTA TCTCCACGTA CCGCGGGGCA GACGTCCAGG TAAGGATCAG CGGGAAAAAG CTCGAACGGA TCCGGTTCCG GCCGCTTTCG GGAAAGCCAC GGTACATGAT CGTGGGTATC GATCCCGGCA CCACCACGGC CATTGCGGCA CTGGATCTGG ATGGCAATCT CCTGCACCTG GAGAGTTCCC GGCAGATGAA CATGTCCGGT GTGATCGAGG CCCTGTACCG CGCGGGAAAA CCGCTGGTGA TCGCTTCTGA TGTGCAGGAG ATGCCGCACA CGGTAGAGAA GATACGGAGG GCGTTCTCGG CAGTGGCGTA CACGCCAAAC CAGGATACGC CGGTTGAGAC AAAACTGGCA CTCACGGCCG GTTACCCGTA CTCAAATGTC CACGAGCGCG ATGCCCTCTC CGCTGCTCTT GATGCAAGCG TGCAGTACCA GCACAAGTTC CGGAACCTCA TCAAGAGAGT ACCTCCCGGC CACGATCTCG ATGAGGTCCG GGCCCGGGTA ATCCGGGGCC AGGCGCTCGA CCAGGTACTG GTGGAGATGC ATGCGGTGGC CCCGTCAGCA GCGCCAGCAG AGGAAGCCCC CACAGCCCCG GCCGGCGAGG GGGGCCGGCA CGATGATCGG GTCCGGGTGC TGGACGGGAT GGTCAAGCGC CTGCGCACGT ACGTTGATGA GCTCCAGGAA GAGGTCAAGG CAAAGGAGTA CGAGATCCAC CGGCTCCAGG GACGGCTCCG GACCGTGCAC GATGACCGGA CCGTGCAACT CGCCAAAGAT GCCGAAGTGG CAAAAAGGGA CGCGATCATC GCAAGCCTCA AAAAAAGGCT GCGCCGGGAG GAGCGGCACG GGCGGACGCT TGCAAAAAGG GTGGAGCGGA TCCGGACCTA TGCCGAGCTC TCGGTGGATG GTGAGGCGCA GCCGGTAAAA GTGCTCGATG CACTCACCCG CGAGGGCCTG CGTCGGCTTA CCGGAGATAC CGGGGTGCAC GAAGGCGATA TCGTGTACGT GCAGCGCACG GGAGGGTGGG GAAAGAGTGT GGTCCGTGAC CTTGCCGAAG CAAAAGTCCG GGCCCTGATC ACCCCGGGAG GCGGGGAAGG GGACGTGCAG ATGGGTGCCG CGTTTCGTGA AGCGGGCATC CCGCTCCTCA CCTCTTCAGA GACCGCGGTT CAGGTAAAGG GCAGGCAGGG CCTTGCTCCC AAAGACCGGA TCGGGCCGGC CATTTCCCGC TGGCAGGAAG AACAGGCGCA GTTTGTCCGC GAGAAGGAGT CCTCACGGAT CGAGCACATG TTCAAGGAGT ACAAGAGCGA ACGGGGTAAG GAAGTAAAAA AAGGCGGGGG CCGGAACGAT GGACGACCGT GA
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Protein sequence | MRDRLSVFGI DIVKGSVRSR SRRPMYALVR LEESEIVSEG TVSMFRLFRL LSEERPDILA VDSIQEIATD QHELFFFLQG LPPQTKLVQV TGGEKKETLG KVAARFNISF DRFDPFAEAR TSARVAALGA GAEVIAFENE SEVVVSRHRS PGRGGWSQNR YVRKIHGAVQ LKGREIEMQL AATGLRYEKK ETKAFGGCSR VLFRVFAARG QVPISTYRGA DVQVRISGKK LERIRFRPLS GKPRYMIVGI DPGTTTAIAA LDLDGNLLHL ESSRQMNMSG VIEALYRAGK PLVIASDVQE MPHTVEKIRR AFSAVAYTPN QDTPVETKLA LTAGYPYSNV HERDALSAAL DASVQYQHKF RNLIKRVPPG HDLDEVRARV IRGQALDQVL VEMHAVAPSA APAEEAPTAP AGEGGRHDDR VRVLDGMVKR LRTYVDELQE EVKAKEYEIH RLQGRLRTVH DDRTVQLAKD AEVAKRDAII ASLKKRLRRE ERHGRTLAKR VERIRTYAEL SVDGEAQPVK VLDALTREGL RRLTGDTGVH EGDIVYVQRT GGWGKSVVRD LAEAKVRALI TPGGGEGDVQ MGAAFREAGI PLLTSSETAV QVKGRQGLAP KDRIGPAISR WQEEQAQFVR EKESSRIEHM FKEYKSERGK EVKKGGGRND GRP
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