Gene Mboo_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2320 
Symbol 
ID5410515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2385352 
End bp2387343 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content62% 
IMG OID640869576 
Producthypothetical protein 
Protein accessionYP_001405477 
Protein GI154151859 
COG category[S] Function unknown 
COG ID[COG2433] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.434022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGACC GCCTGAGTGT ATTTGGGATC GATATTGTCA AAGGCTCGGT GCGTTCGCGG 
TCCCGCCGGC CGATGTACGC GCTCGTCAGG CTGGAAGAAA GCGAGATTGT AAGCGAAGGT
ACGGTCTCAA TGTTCCGGCT CTTCCGGCTC CTCTCTGAAG AGCGGCCCGA CATCCTTGCC
GTTGACAGCA TCCAGGAGAT CGCGACCGAC CAGCACGAAC TCTTCTTCTT TTTACAAGGG
TTGCCCCCGC AGACAAAGCT CGTGCAGGTG ACCGGTGGCG AAAAGAAGGA GACGCTCGGG
AAGGTTGCGG CCCGGTTCAA CATCAGCTTT GACCGGTTCG ACCCCTTTGC CGAGGCCCGC
ACTTCGGCCC GGGTGGCAGC CCTTGGGGCC GGGGCAGAGG TCATCGCGTT CGAGAACGAA
AGTGAAGTCG TAGTAAGCCG GCACCGCTCG CCCGGCCGGG GCGGGTGGAG CCAGAACCGG
TACGTGAGAA AGATCCATGG CGCTGTCCAG CTCAAGGGGC GCGAGATCGA GATGCAGCTT
GCCGCAACAG GGCTCCGGTA CGAGAAGAAG GAGACCAAAG CCTTTGGCGG GTGCAGCCGG
GTGCTCTTCC GGGTCTTTGC CGCCCGGGGC CAGGTCCCTA TCTCCACGTA CCGCGGGGCA
GACGTCCAGG TAAGGATCAG CGGGAAAAAG CTCGAACGGA TCCGGTTCCG GCCGCTTTCG
GGAAAGCCAC GGTACATGAT CGTGGGTATC GATCCCGGCA CCACCACGGC CATTGCGGCA
CTGGATCTGG ATGGCAATCT CCTGCACCTG GAGAGTTCCC GGCAGATGAA CATGTCCGGT
GTGATCGAGG CCCTGTACCG CGCGGGAAAA CCGCTGGTGA TCGCTTCTGA TGTGCAGGAG
ATGCCGCACA CGGTAGAGAA GATACGGAGG GCGTTCTCGG CAGTGGCGTA CACGCCAAAC
CAGGATACGC CGGTTGAGAC AAAACTGGCA CTCACGGCCG GTTACCCGTA CTCAAATGTC
CACGAGCGCG ATGCCCTCTC CGCTGCTCTT GATGCAAGCG TGCAGTACCA GCACAAGTTC
CGGAACCTCA TCAAGAGAGT ACCTCCCGGC CACGATCTCG ATGAGGTCCG GGCCCGGGTA
ATCCGGGGCC AGGCGCTCGA CCAGGTACTG GTGGAGATGC ATGCGGTGGC CCCGTCAGCA
GCGCCAGCAG AGGAAGCCCC CACAGCCCCG GCCGGCGAGG GGGGCCGGCA CGATGATCGG
GTCCGGGTGC TGGACGGGAT GGTCAAGCGC CTGCGCACGT ACGTTGATGA GCTCCAGGAA
GAGGTCAAGG CAAAGGAGTA CGAGATCCAC CGGCTCCAGG GACGGCTCCG GACCGTGCAC
GATGACCGGA CCGTGCAACT CGCCAAAGAT GCCGAAGTGG CAAAAAGGGA CGCGATCATC
GCAAGCCTCA AAAAAAGGCT GCGCCGGGAG GAGCGGCACG GGCGGACGCT TGCAAAAAGG
GTGGAGCGGA TCCGGACCTA TGCCGAGCTC TCGGTGGATG GTGAGGCGCA GCCGGTAAAA
GTGCTCGATG CACTCACCCG CGAGGGCCTG CGTCGGCTTA CCGGAGATAC CGGGGTGCAC
GAAGGCGATA TCGTGTACGT GCAGCGCACG GGAGGGTGGG GAAAGAGTGT GGTCCGTGAC
CTTGCCGAAG CAAAAGTCCG GGCCCTGATC ACCCCGGGAG GCGGGGAAGG GGACGTGCAG
ATGGGTGCCG CGTTTCGTGA AGCGGGCATC CCGCTCCTCA CCTCTTCAGA GACCGCGGTT
CAGGTAAAGG GCAGGCAGGG CCTTGCTCCC AAAGACCGGA TCGGGCCGGC CATTTCCCGC
TGGCAGGAAG AACAGGCGCA GTTTGTCCGC GAGAAGGAGT CCTCACGGAT CGAGCACATG
TTCAAGGAGT ACAAGAGCGA ACGGGGTAAG GAAGTAAAAA AAGGCGGGGG CCGGAACGAT
GGACGACCGT GA
 
Protein sequence
MRDRLSVFGI DIVKGSVRSR SRRPMYALVR LEESEIVSEG TVSMFRLFRL LSEERPDILA 
VDSIQEIATD QHELFFFLQG LPPQTKLVQV TGGEKKETLG KVAARFNISF DRFDPFAEAR
TSARVAALGA GAEVIAFENE SEVVVSRHRS PGRGGWSQNR YVRKIHGAVQ LKGREIEMQL
AATGLRYEKK ETKAFGGCSR VLFRVFAARG QVPISTYRGA DVQVRISGKK LERIRFRPLS
GKPRYMIVGI DPGTTTAIAA LDLDGNLLHL ESSRQMNMSG VIEALYRAGK PLVIASDVQE
MPHTVEKIRR AFSAVAYTPN QDTPVETKLA LTAGYPYSNV HERDALSAAL DASVQYQHKF
RNLIKRVPPG HDLDEVRARV IRGQALDQVL VEMHAVAPSA APAEEAPTAP AGEGGRHDDR
VRVLDGMVKR LRTYVDELQE EVKAKEYEIH RLQGRLRTVH DDRTVQLAKD AEVAKRDAII
ASLKKRLRRE ERHGRTLAKR VERIRTYAEL SVDGEAQPVK VLDALTREGL RRLTGDTGVH
EGDIVYVQRT GGWGKSVVRD LAEAKVRALI TPGGGEGDVQ MGAAFREAGI PLLTSSETAV
QVKGRQGLAP KDRIGPAISR WQEEQAQFVR EKESSRIEHM FKEYKSERGK EVKKGGGRND
GRP