Gene Mboo_2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2295 
Symbol 
ID5411250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2366464 
End bp2366895 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID640869549 
Product30S ribosomal protein S6e 
Protein accessionYP_001405452 
Protein GI154151834 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAT TAAAAGTCGT AGTATCAGAC CCGAAGACCG GTCGCGCATA CAATGTCGAT 
GCCAGCACCG GAGCGGCAGG AGCAGTCGTG GGCAAGAAGA TCGGGGATGA AGTGGACGCC
GGCCCCCTCG GGCTTGCCGG TTACAAGATC CTGATCACCG GGGGCTCGGA CCAGACCGGG
ACACCGGCAC GAAAGAGCCT GCCGGGCGCA GGGCGGAGGA AACTCCTGCT TGCAGAGGGC
GTAGGGTTCC ACCCCGTGAT GGAAGGCGAG CGCAAGAGAA AGATGATCCG CGCCCACCAG
ATCACCCCCG AGTTTGTGCA GGTCAACGCA CGCGTGACCG CGTACGGCGA AAAGACCCTC
GACGAGCTCT TCCCCAAGGT CGAAGGCGCC GAGAAGAAAG AGAAGACCAA AGAGAGAAAG
GTCCGGAAGT AA
 
Protein sequence
MVELKVVVSD PKTGRAYNVD ASTGAAGAVV GKKIGDEVDA GPLGLAGYKI LITGGSDQTG 
TPARKSLPGA GRRKLLLAEG VGFHPVMEGE RKRKMIRAHQ ITPEFVQVNA RVTAYGEKTL
DELFPKVEGA EKKEKTKERK VRK