| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2294 |
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| Symbol | |
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| ID | 5410885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2364501 |
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| End bp | 2366276 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640869548 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001405451 |
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| Protein GI | 154151833 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC CGAAGATCAG GACGCCGATC GTGTGCGTCA TGGGACATGT GGATCACGGG
AAAACCTCAC TTCTCGACCG GATCCGCGGG TCATCGGTCG TTGCCTCGGA AGCAGGTGCG
ATCACCCAGC ACATTGGCGC TACAATCGTC CCCATCGAGG CGATCCGGAA GATGAGCGGA
TCGATGGAGA AGATCCCCAT CAACATCCCC GGCCTGCTCT TTATCGATAC GCCGGGGCAC
CACGCGTTTA CCACACTTAG GGCCCGGGGA GGGGCGCTTG CCGACATGGC GATCCTGGTC
GTGGACATCA GCCAGGGGTT CCAGCCCCAG ACCATTGAGG CCCTGCAGAT CCTGCGGAAC
TGCAAGACGC CGTTTGTGAT CGCTGCCACC AAGGTGGACC GGATCCATGG CTGGCGGATC
AACAAGGACG AATCGTTTTT GTCCAGTTTT GGCAAGCAGA ACGAACGGGT GAAGACCGAT
ATCGAGACCA AGACCTACGA GATCGTTGGC AAACTCTCCG ATCTCGGGTT CTCCGCGGAC
CGGTACGACC GGGTCTCGGA TTTCCAGCGC AACCTTGCAA TTGTTCCCGT AAGCGCCCAC
ACGGGCGAGG GGATCGCGGA CCTCCTCATG ATCATGATCG GGCTTGCCCA GCGGTACATG
GGCGAGGAGC TCAAACTTTC TGCAGAGGGA CCAGGCGAGG GGACCGTGCT CGAGGTAAAA
GAAGAGCGGG GCCTGGGGAC AACGCTTGAT GTGATCCTGT ACAACGGCAC GCTCTCGGTC
GGTGACGAGA TCGCGATGGC CAGCCAGGAT GACGTGGTGA CCACCAAGGT CAGATCGCTT
TTGAAACCCC GACCCATGAA GGAGATCCTC ATCGAGGACC GGTTCGAGCG CGTAAAGTCG
GTTGTGGCGG CGTCCGGGAT CAAGGTTTCG GCCCCGGGCC TTGAAAAAGT GATTGCCGGT
TCGCCGCTCT TTGTGACCCG GGGGAACATG GACGAGCTCG CCGCCAGGAT CCGAAAGGAG
ATGCAGGAGA TCCATGTGAA CCTTGCCGAA GAGGGGATCG TGATCAAGGC GGATACAATC
GGGGCACTCG AAGCGCTCTG CAAAGAGCTG GAGTCAAAAG AGATCAAAGT GATGCGGGCA
CAGGTTGGCC CGGTAAGCCG GCACGACCTG ATCGACACCG AGACCATCAA GAACCCGACA
TTCCGCGTGC TCCTGTCCTT CAATACCCCG ATCCTTCCCG ACGCGGCGGA TATGATAAAA
GACCCGCTCT ACACGCAGGT GAAGGTCTTC TCAGGCCAGG TGATCTACCA GCTCATCGAT
CAGTACGTGG CATGGCGCGA CGAGCAGAAA CGGATCGCGG AGAAGGCGCA ATTCGAGCAC
GTGATGATGC CGGCAAAAAT CCGGTTGCTG CCGGACTGCG TGTTCCGGCA GAGCAACCCG
GCCGTGGTCG GGGTGCGCGT GCTGGGCGGG AAGCTCCGTG CGGATGTGGA CCTGGTAAAG
ACTGACGGGA AAAAGATCGG GCACCTCAAG ACCATGCAGC TCCGGCAGGA ATCGATTAAG
GAGGCGGACG CAGGCCTTGA GGTGGCAATC TCGATTGAAG GGGCAACCGT AGGACGGCAG
CTCAACGTGG GAGACGATCT CCTGGTGGAC CTGCCCGAGC GCCACGTGAA GGTGCTTGAA
CGTGAGATGC TCAAGAACCT CAACATCAGC ACGCAGGAAG TGCTCGCGGA ATTTGTTGCG
ATCCGGCGCA AGGCCGAGCC GTTCTGGGGT AAGTGA
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| Protein sequence | MSDPKIRTPI VCVMGHVDHG KTSLLDRIRG SSVVASEAGA ITQHIGATIV PIEAIRKMSG
SMEKIPINIP GLLFIDTPGH HAFTTLRARG GALADMAILV VDISQGFQPQ TIEALQILRN
CKTPFVIAAT KVDRIHGWRI NKDESFLSSF GKQNERVKTD IETKTYEIVG KLSDLGFSAD
RYDRVSDFQR NLAIVPVSAH TGEGIADLLM IMIGLAQRYM GEELKLSAEG PGEGTVLEVK
EERGLGTTLD VILYNGTLSV GDEIAMASQD DVVTTKVRSL LKPRPMKEIL IEDRFERVKS
VVAASGIKVS APGLEKVIAG SPLFVTRGNM DELAARIRKE MQEIHVNLAE EGIVIKADTI
GALEALCKEL ESKEIKVMRA QVGPVSRHDL IDTETIKNPT FRVLLSFNTP ILPDAADMIK
DPLYTQVKVF SGQVIYQLID QYVAWRDEQK RIAEKAQFEH VMMPAKIRLL PDCVFRQSNP
AVVGVRVLGG KLRADVDLVK TDGKKIGHLK TMQLRQESIK EADAGLEVAI SIEGATVGRQ
LNVGDDLLVD LPERHVKVLE REMLKNLNIS TQEVLAEFVA IRRKAEPFWG K
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