Gene Mboo_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2266 
Symbol 
ID5411083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2332911 
End bp2334287 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content58% 
IMG OID640869518 
Producthypothetical protein 
Protein accessionYP_001405423 
Protein GI154151805 
COG category[S] Function unknown 
COG ID[COG1650] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000113487 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0819386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCC TGAACAGTGG TGAACGTCCA GAGAGGTTTT TTTCTGGCAG AGCATACCGG 
AAGATCATGA AAGTTGCGCT GATCCACTCC CGCGATGATG TGGCGGGTTG TACTATCCGG
CGCCACATCG AGCAGTGTCT CGATGACGCT CATGGGAGCG CAAACGGGAG AACCTATGAA
TTTGTTGAGG TTGGTGGCAG GCTTATCAAT GCCGAGGGAG TCGATGCCAC TCTGGATGTT
AATCTGGTTA TTTTCCTCTC ACGTCATTCC AGCGTAAACC CGGTACCGGT GCTCACGGTC
CATGCCACCG GGAATTTCGG CGCAGCGGAA CTGGGGGGGA GCCCCCGCAC GCTTGCCCCT
GCTGCACCCG CCATGATGCA GGCGACCCTG CGGGCGCTCG CCCGGTACTG CCCCGAAGGG
TACCGGGTCT CGTACGAGGT CACCCACCAT GGCCCCACGG GGCTTTCCCA CCCTTCGTTT
TTTGTCGAGA TAGGTAGCAC GGAAAAAGAG TGGGTTGACC CGGTGGCCGG CCGGGCAGTG
GCTGAGGCCG TGCTCGGGGC AGATCCGGCC GGTGCTGTCC CGCTGATCGG TATCGGGGGT
ACCCATTACG CCCCCCGCGA GACCGCGATT GCCCTTTCCA GCCGGGGGGC ATTCGGCCAT
ATTGCCAGCT CCCGGCTCCA GGTAGCCCTT CTCGACCGGG AGCTGGTGCA GGCTATGGTG
GTGCAGAGCC GGGCAGTTGC TGCGTATATT GATCGGAAGG CAGTCCTTCC TGGTGACGTT
TCCCGGATTT CTGCGATCCT TGACGAATTG GGCATTCCCC GGCTGTCCGA GACAGAGATC
ACTTCCCTTG GGCACCTTGC ATGGGAGGCC TACAGGGAGG TACGGGCTCT TGCTGCAACA
GTTGGACCAC AAACCCGGTG CTTTATCCAT GCACTCGAAG GCACCGGTCC TCTTGTTCTG
GTCTCCCTTG ATCCGGTACT CCTAAGTGAG GCCAAGAGAT GTGACGAATC TGCACTGGTC
CAGAGGTTTG GGCCGCTTCC GGTGGCACAC CTGGCCACAG AGGACAACGT GCTTCTCCCG
CAATTCGTGG CTTTTGAACG CAATTCTTCG AAAATAATAA ATGATTTAAA TACATTGTGC
GTGAAAATCA TACGTAACAG GGAAAGCACA GCGACGGAGA ACGATTATCT GGTCATCAGA
AAGGTCCGGT TTGACCCCCA AAAAGCGCGC GAACTTGGGG TGCCGGCCGG GCCTGCCTAC
CGCCAGCTTG CCGCCGGGCA GGCTGTGGAG TATGATGGCC AGATAATAAC ACCTGACAGG
GTCTCCGTTG CCACGGAGAC CAGAATCCAC ATCCCGGGAC TGGAGAACTA CTCATGA
 
Protein sequence
MALLNSGERP ERFFSGRAYR KIMKVALIHS RDDVAGCTIR RHIEQCLDDA HGSANGRTYE 
FVEVGGRLIN AEGVDATLDV NLVIFLSRHS SVNPVPVLTV HATGNFGAAE LGGSPRTLAP
AAPAMMQATL RALARYCPEG YRVSYEVTHH GPTGLSHPSF FVEIGSTEKE WVDPVAGRAV
AEAVLGADPA GAVPLIGIGG THYAPRETAI ALSSRGAFGH IASSRLQVAL LDRELVQAMV
VQSRAVAAYI DRKAVLPGDV SRISAILDEL GIPRLSETEI TSLGHLAWEA YREVRALAAT
VGPQTRCFIH ALEGTGPLVL VSLDPVLLSE AKRCDESALV QRFGPLPVAH LATEDNVLLP
QFVAFERNSS KIINDLNTLC VKIIRNREST ATENDYLVIR KVRFDPQKAR ELGVPAGPAY
RQLAAGQAVE YDGQIITPDR VSVATETRIH IPGLENYS