Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2266 |
Symbol | |
ID | 5411083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2332911 |
End bp | 2334287 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640869518 |
Product | hypothetical protein |
Protein accession | YP_001405423 |
Protein GI | 154151805 |
COG category | [S] Function unknown |
COG ID | [COG1650] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000113487 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0819386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCC TGAACAGTGG TGAACGTCCA GAGAGGTTTT TTTCTGGCAG AGCATACCGG AAGATCATGA AAGTTGCGCT GATCCACTCC CGCGATGATG TGGCGGGTTG TACTATCCGG CGCCACATCG AGCAGTGTCT CGATGACGCT CATGGGAGCG CAAACGGGAG AACCTATGAA TTTGTTGAGG TTGGTGGCAG GCTTATCAAT GCCGAGGGAG TCGATGCCAC TCTGGATGTT AATCTGGTTA TTTTCCTCTC ACGTCATTCC AGCGTAAACC CGGTACCGGT GCTCACGGTC CATGCCACCG GGAATTTCGG CGCAGCGGAA CTGGGGGGGA GCCCCCGCAC GCTTGCCCCT GCTGCACCCG CCATGATGCA GGCGACCCTG CGGGCGCTCG CCCGGTACTG CCCCGAAGGG TACCGGGTCT CGTACGAGGT CACCCACCAT GGCCCCACGG GGCTTTCCCA CCCTTCGTTT TTTGTCGAGA TAGGTAGCAC GGAAAAAGAG TGGGTTGACC CGGTGGCCGG CCGGGCAGTG GCTGAGGCCG TGCTCGGGGC AGATCCGGCC GGTGCTGTCC CGCTGATCGG TATCGGGGGT ACCCATTACG CCCCCCGCGA GACCGCGATT GCCCTTTCCA GCCGGGGGGC ATTCGGCCAT ATTGCCAGCT CCCGGCTCCA GGTAGCCCTT CTCGACCGGG AGCTGGTGCA GGCTATGGTG GTGCAGAGCC GGGCAGTTGC TGCGTATATT GATCGGAAGG CAGTCCTTCC TGGTGACGTT TCCCGGATTT CTGCGATCCT TGACGAATTG GGCATTCCCC GGCTGTCCGA GACAGAGATC ACTTCCCTTG GGCACCTTGC ATGGGAGGCC TACAGGGAGG TACGGGCTCT TGCTGCAACA GTTGGACCAC AAACCCGGTG CTTTATCCAT GCACTCGAAG GCACCGGTCC TCTTGTTCTG GTCTCCCTTG ATCCGGTACT CCTAAGTGAG GCCAAGAGAT GTGACGAATC TGCACTGGTC CAGAGGTTTG GGCCGCTTCC GGTGGCACAC CTGGCCACAG AGGACAACGT GCTTCTCCCG CAATTCGTGG CTTTTGAACG CAATTCTTCG AAAATAATAA ATGATTTAAA TACATTGTGC GTGAAAATCA TACGTAACAG GGAAAGCACA GCGACGGAGA ACGATTATCT GGTCATCAGA AAGGTCCGGT TTGACCCCCA AAAAGCGCGC GAACTTGGGG TGCCGGCCGG GCCTGCCTAC CGCCAGCTTG CCGCCGGGCA GGCTGTGGAG TATGATGGCC AGATAATAAC ACCTGACAGG GTCTCCGTTG CCACGGAGAC CAGAATCCAC ATCCCGGGAC TGGAGAACTA CTCATGA
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Protein sequence | MALLNSGERP ERFFSGRAYR KIMKVALIHS RDDVAGCTIR RHIEQCLDDA HGSANGRTYE FVEVGGRLIN AEGVDATLDV NLVIFLSRHS SVNPVPVLTV HATGNFGAAE LGGSPRTLAP AAPAMMQATL RALARYCPEG YRVSYEVTHH GPTGLSHPSF FVEIGSTEKE WVDPVAGRAV AEAVLGADPA GAVPLIGIGG THYAPRETAI ALSSRGAFGH IASSRLQVAL LDRELVQAMV VQSRAVAAYI DRKAVLPGDV SRISAILDEL GIPRLSETEI TSLGHLAWEA YREVRALAAT VGPQTRCFIH ALEGTGPLVL VSLDPVLLSE AKRCDESALV QRFGPLPVAH LATEDNVLLP QFVAFERNSS KIINDLNTLC VKIIRNREST ATENDYLVIR KVRFDPQKAR ELGVPAGPAY RQLAAGQAVE YDGQIITPDR VSVATETRIH IPGLENYS
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