| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2258 |
|---|
| Symbol | |
|---|
| ID | 5411075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2327345 |
|---|
| End bp | 2327986 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640869510 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001405415 |
|---|
| Protein GI | 154151797 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0351185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATG CCGATATTGA TCGGATCTAC CGGACACTGC AGCCTGAACA GATTCCCTGG
TACAGCGAGA CCCCTCCTGA TGCCCTGGTA AAACTGGTTC AGGATGGGAT CGTCCGGCCC
TGCAGGGCTG TCGATCTCGG ATGCGGTGCC GGCAGTTATG TGATCTATCT CGCCGGTCTC
GGATTTGATG TCACGGGCGT GGACAGCTCC CCTGCCGCGA TCCGGATTGC ACAGGCGCAT
GCAAAAAAAC AGGGGGCCCG GTGCAGGTTT GTGGTCGCTG ACCTGCTTGG CGACCTCCAC
GAAGTGACCA GCACTTTTGA CTTTGCCTAT GACTGGGAAC TCCTGCACCA CATATTCCCG
GAAGATCGGG AGACGTATAT CAAAAACGTA TATAAAATCA CCAACCCGGG AGCGTTGTAC
TTCTCGGTCT GCTTTGATGA GAGCGACCCC CATTTTGGCG GAGCCGGGAA ATACCGGACG
ACCCAGATCG GGACAACACT CTATTTTTCA TCGGAGTCCG AGATCCGGAA CCTCACCTCG
CCGTATTTTG ACATCCGTGA GTTGAAGACG ATCGATGTTA CAAGTAAATT CGGGCCGCAC
CGGGTCATTT ACCTGCTCGC CAGCCGGCTC TTGAGATCAT AA
|
|---|
| Protein sequence | MKYADIDRIY RTLQPEQIPW YSETPPDALV KLVQDGIVRP CRAVDLGCGA GSYVIYLAGL
GFDVTGVDSS PAAIRIAQAH AKKQGARCRF VVADLLGDLH EVTSTFDFAY DWELLHHIFP
EDRETYIKNV YKITNPGALY FSVCFDESDP HFGGAGKYRT TQIGTTLYFS SESEIRNLTS
PYFDIRELKT IDVTSKFGPH RVIYLLASRL LRS
|
|---|
| |