Gene Mboo_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2256 
Symbol 
ID5411073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2324559 
End bp2325302 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID640869508 
ProductABC-2 type transporter 
Protein accessionYP_001405413 
Protein GI154151795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.038902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCCC GGCTCTTTGT GCGGAGCGTC CTTCTTGTAG CCGAGAAGAA CATGCGGATC 
TACTATTACA AGGGTGCGGT CGTAATCTTC GGTCTCCTTT TTCCCTTCCT GATGTTTTTA
ACCTTCTTTA TCGGGCGCAA CCTCGACCTC GTCCTCTTCT TCCCGGCGTT CCTGGGCATG
ATGCTCTTCT TCTCCTCGTC CTCCACCGGC CCGCTGATCA CACCATGGGA GAAACGGGAG
AAGACCTACG AACGCCTCCT TTCCCTGCCG GTAACGCTGG AGAGCATCAT TCTGGGCGAT
ATCCTTGCTG GGGCGCTCTT TGGGATCGTG ATCACCACGA TTGTCTGGAG TGCGGGTACG
CTCCTCCTCC ACCTTCCCCT CGCCCATCCC CTGCTCCTCG CGGTAGCGCT CGTTCTTGGC
GGGTTTGCCT TCGCTGCGCT TGGTACCCTC CTCTCCTCCC CGGCCATGAG CAACCCCTCC
AACGTGATGA TGGTCTCCAA CCTCATCCGC CTGCCCCTGA TCTTTGTCTC GGGCATCTTT
ATCCCACTTA CCCAGCTCGG GAGCTGGAGA TGGACCAACG AGCTCTCTCC GCTCACCTAC
CTGGTCGACC TGTTCAACGG GGCGATCACC AACACCGGAG TCTATCCCGC AGTTGTGGAT
ATTTTCGTTC TGGGCGTCGT CATCGTTGCA TTCGTGGGGG CGGCAAAACT GATCCAGCAG
TACAACCTTT CAAAGGGGAT CTAG
 
Protein sequence
MDPRLFVRSV LLVAEKNMRI YYYKGAVVIF GLLFPFLMFL TFFIGRNLDL VLFFPAFLGM 
MLFFSSSSTG PLITPWEKRE KTYERLLSLP VTLESIILGD ILAGALFGIV ITTIVWSAGT
LLLHLPLAHP LLLAVALVLG GFAFAALGTL LSSPAMSNPS NVMMVSNLIR LPLIFVSGIF
IPLTQLGSWR WTNELSPLTY LVDLFNGAIT NTGVYPAVVD IFVLGVVIVA FVGAAKLIQQ
YNLSKGI