Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2256 |
Symbol | |
ID | 5411073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2324559 |
End bp | 2325302 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640869508 |
Product | ABC-2 type transporter |
Protein accession | YP_001405413 |
Protein GI | 154151795 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.038902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCCCC GGCTCTTTGT GCGGAGCGTC CTTCTTGTAG CCGAGAAGAA CATGCGGATC TACTATTACA AGGGTGCGGT CGTAATCTTC GGTCTCCTTT TTCCCTTCCT GATGTTTTTA ACCTTCTTTA TCGGGCGCAA CCTCGACCTC GTCCTCTTCT TCCCGGCGTT CCTGGGCATG ATGCTCTTCT TCTCCTCGTC CTCCACCGGC CCGCTGATCA CACCATGGGA GAAACGGGAG AAGACCTACG AACGCCTCCT TTCCCTGCCG GTAACGCTGG AGAGCATCAT TCTGGGCGAT ATCCTTGCTG GGGCGCTCTT TGGGATCGTG ATCACCACGA TTGTCTGGAG TGCGGGTACG CTCCTCCTCC ACCTTCCCCT CGCCCATCCC CTGCTCCTCG CGGTAGCGCT CGTTCTTGGC GGGTTTGCCT TCGCTGCGCT TGGTACCCTC CTCTCCTCCC CGGCCATGAG CAACCCCTCC AACGTGATGA TGGTCTCCAA CCTCATCCGC CTGCCCCTGA TCTTTGTCTC GGGCATCTTT ATCCCACTTA CCCAGCTCGG GAGCTGGAGA TGGACCAACG AGCTCTCTCC GCTCACCTAC CTGGTCGACC TGTTCAACGG GGCGATCACC AACACCGGAG TCTATCCCGC AGTTGTGGAT ATTTTCGTTC TGGGCGTCGT CATCGTTGCA TTCGTGGGGG CGGCAAAACT GATCCAGCAG TACAACCTTT CAAAGGGGAT CTAG
|
Protein sequence | MDPRLFVRSV LLVAEKNMRI YYYKGAVVIF GLLFPFLMFL TFFIGRNLDL VLFFPAFLGM MLFFSSSSTG PLITPWEKRE KTYERLLSLP VTLESIILGD ILAGALFGIV ITTIVWSAGT LLLHLPLAHP LLLAVALVLG GFAFAALGTL LSSPAMSNPS NVMMVSNLIR LPLIFVSGIF IPLTQLGSWR WTNELSPLTY LVDLFNGAIT NTGVYPAVVD IFVLGVVIVA FVGAAKLIQQ YNLSKGI
|
| |