Gene Mboo_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2210 
Symbol 
ID5411230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2285688 
End bp2287025 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content58% 
IMG OID640869460 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001405367 
Protein GI154151749 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAG AAATTATTGC AGTGGGCGGA TACGACGAGG TCGGGCGGAA TATGACCGCC 
GTCCGCTGCG GCAAAGAGAT TGTCATTTTT GACATGGGGC TCCGCTTGGA CCAGGTCATG
ATCCACGAGG ATGCGGAGCT TGAGAATATG CACTCCCTGG ATCTGATCAA GATCGGGGCG
ATACCAGACG ACACCATGAT GAACTCGGTT GAAGGGACCG TAAAAGCGAT TGTCTGTTCC
CACGGGCACC TCGACCACAT TGGGGCGATC CCGAAGCTTG CGCACAGGTA CAATGCGCCT
ATCATCGCCG CGCCGTATGC GACGGAACTG ATCCGGCAGC AGATCTCCGG TGAACAGAAG
TTCGGGGTTA ACAACAAGCT CTTCGCACTC AAACCCGGGC AGCGGTACAC GATCTCGCAG
CATCTTGTGC TCGAATTCGT ACGGGCCCAG CACTCGATTA TCGATACCGT GACACCGGTG
CTCCACACCC CTCACGGTGC GATCGTCTAT GCCTGCGATT TCAAACTTGA CCGGACACCG
GTCATCGGCG AACCCCCGGA CTTTGCCCGG CTCCGCCAGA TCGGAAAGGA AGGCGTGCTT
GCCCTCATCG TAGAGAGCAC GTATGTCGAC CGGCCCGGCC GGTGCCCGAG CGAACGGATC
GCACGCGACC TGGTGCGGGA TGTCATTACC AGTTACGAGG ACGACAAGAG CTCGTTAATT
GTCTCTACGT TCTCCTCGCA TATCGCACGT GTCAAGACCA TTGCGGAGTG CGCACACGAG
ATCGGGAGAA AACCGGTGCT TCTGGGCCGT TCCATGGAAA AGTACGCGGT CACTGCCGAA
CAGATGAAGA TGGTCTCGCT CCCGCAGGAT ACGGGTATCT TCGGGAACCG CAGGACGGTA
GACCGGACCC TGCGCCGGAT AATGAAGGAA GGCAAGGGCA AGTTCCTCCC CATCATCACC
GGCCATCAGG GGGAACCGGG CTCTATCCTG ACCCGGCTTG CCCTCGGGGA TACGCCGTAT
CAGATCACCA AGGGCGACAA GATCCTCTTC TCGGCAAACG TGATCCCTAA CCCCATGAAT
TTCGGGCAGC GGTACATGGT CGAGGCGCAC TTAAAGATGG CCGGCGCCCG GCTCTTCCCT
GACCTTCACG TGAGTGGTCA CGCGTACCGT GAGGACCACT ACGAGTTTGT CAGCCTCTTA
AACCCGCAGC ACATCATCCC GGCCCACGGG AACATAAGGA TGACCGGCTC GTATGCGGAG
TTCACCAAGG ATCTTGGCTA TGTGTTGGGC AATGACGTCC ATATCATGTC AAACGGCCAG
CGGCTCAAAC TGAACTAG
 
Protein sequence
MDIEIIAVGG YDEVGRNMTA VRCGKEIVIF DMGLRLDQVM IHEDAELENM HSLDLIKIGA 
IPDDTMMNSV EGTVKAIVCS HGHLDHIGAI PKLAHRYNAP IIAAPYATEL IRQQISGEQK
FGVNNKLFAL KPGQRYTISQ HLVLEFVRAQ HSIIDTVTPV LHTPHGAIVY ACDFKLDRTP
VIGEPPDFAR LRQIGKEGVL ALIVESTYVD RPGRCPSERI ARDLVRDVIT SYEDDKSSLI
VSTFSSHIAR VKTIAECAHE IGRKPVLLGR SMEKYAVTAE QMKMVSLPQD TGIFGNRRTV
DRTLRRIMKE GKGKFLPIIT GHQGEPGSIL TRLALGDTPY QITKGDKILF SANVIPNPMN
FGQRYMVEAH LKMAGARLFP DLHVSGHAYR EDHYEFVSLL NPQHIIPAHG NIRMTGSYAE
FTKDLGYVLG NDVHIMSNGQ RLKLN