Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2171 |
Symbol | |
ID | 5411282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2242308 |
End bp | 2242949 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640869417 |
Product | hypothetical protein |
Protein accession | YP_001405328 |
Protein GI | 154151710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.3355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATATG ATATCGCGCA CCGGGGACGA CTCTCGCACT ATGGCAGCGC GGAACGTAAG CGCTTTACCT CGTCCCTCAA GAAGATCCGG TCCGATACGG ATCTCCTGCT GGAAGACATC GAGGCATACC ATATTTACAT GGCTGCAAAG ATCACCGAGA AAGTGCCAGG GGATATTGCG GAGGTTGGTG TATACAAAGG GGGATCGGCC AAGATTATCT GTTCGGCCAA GGGGAATCGT GCCCTCCACC TTTTCGACAC CTTTGCCGGC CTGCCCCGGG TGGATGACGT GGATGCGGTC TGGCCGTTCT ATGAGGGGAA ATTTGCCGCC TCCTACGATG AGGTGAAAGC GTACCTGGCG TCCGAGAAGA ATGTTCACCT GTACAAAGGT CTCTTTCCCG ATACATCAGC CCCGGTTACG GACAAGAAAT TCTCCTTTGT CAATCTCGAT GTGGATACCT ACGACAGTAC CAAAAAATGC CTTGAATTTT TTTACCCCCG GATGAGCCCC GGTGGGGTGA TTGTTTCCCA TGATTATCTT ACCGCACCGG GGGTGCGAAA GGCCGTGGAT GAGTACTTTG CCAACAAGCC CGAACCTGTG GTGGAGACCG CGGCCTCCCA ATGTATCGTG GTGAAAGTAT AA
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Protein sequence | MGYDIAHRGR LSHYGSAERK RFTSSLKKIR SDTDLLLEDI EAYHIYMAAK ITEKVPGDIA EVGVYKGGSA KIICSAKGNR ALHLFDTFAG LPRVDDVDAV WPFYEGKFAA SYDEVKAYLA SEKNVHLYKG LFPDTSAPVT DKKFSFVNLD VDTYDSTKKC LEFFYPRMSP GGVIVSHDYL TAPGVRKAVD EYFANKPEPV VETAASQCIV VKV
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