Gene Mboo_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2154 
Symbol 
ID5410130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2224820 
End bp2225905 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content55% 
IMG OID640869399 
Productresponse regulator receiver protein 
Protein accessionYP_001405311 
Protein GI154151693 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.217274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTG CGGAACGGTG GTCTGTGATG GCAAAGGTAA CAATGCTTAT TGCTGTCGGG 
AATGCTGCAG AGGCAGAAGA ACTTGAATCT TTGGCGAATA AAGAAGGGTT CGGGGTACTG
GAGCGGGTGA CGACCGGAGA CAAGGCAGTT GCCCTGGCGG AATCCCGTCG CCCGGATGTT
GTCCTTCTGG GCGCACCTTC CTTTGGAAAT ATGAGCCTGA ATGAAATCCT TGAAAGGATC
CAATCCGGTC TGGGCATACC GGTGATTCTG GTAGCGGATT CTGATGAGGA TCTTCCCGAT
CTTGACAACC CTGCTGGTCA TCCCTGCAGG TATCTGGTCC GGCCCTTCGG CCCCCGCACG
TTCAGGAATG TGGTGGAAGC TGCCTATTCC CGCACCACCC GCACCGTTAG AAAAAAAGCA
TATCCTGCCT CTCTGGTGCG AAAAGCAGCT CACGACATAA ATAACTCCCT ATCCTCAGCA
CTTGCCAATA TCCAGCTTGC ACGCCGGTCC TGTACGCATG AGGAGGATGA ATGCCGGCAT
CTGGATGATG CAGAAAAGAG TATCCTGCGG GCACGTGACC ATTCCATCCA GCTGCTTGAG
CCATCATTAA AGGAACTGGA GGAAACAGAA GGTGCGGTAA AGATAGCACC GGCACCCCCT
GCACACCCGC GCCGGTCACA TGAGAAGAAA AAAGGTGCCG CTGCCGGTTA CCGGATCCTC
CTGATGGACG ATGAGGAAGC AATTCTCTCG GCAACAAGCG ATATGCTCTC ATTCCTGGGA
CACACGGTCA CCGTCGCAAA GAGCGGGGAG GATTCCATCG AAATGTACAG GCAGGCATAT
GCCGGAGACT CACGATTCGA TGTCGTAATC CTTGACATTA CGGTGCCATG CGGGATCGGT
GCCGAAGAAA CACTTCCCCG TCTCCGGGAG ATCGATCCGA ATGTACGGGC AATCATCTCC
AGCGGGTACG CTACCCATCC TCTTCTGGTC AACTATGCCG CCAGCGGATT TGTTGCCGCC
CTTATCAAGC CGTACGGGTT CAAGGAACTT GAGGAATCCC TGGCACAGAT CTCCCTCCGG
AAATAA
 
Protein sequence
MSVAERWSVM AKVTMLIAVG NAAEAEELES LANKEGFGVL ERVTTGDKAV ALAESRRPDV 
VLLGAPSFGN MSLNEILERI QSGLGIPVIL VADSDEDLPD LDNPAGHPCR YLVRPFGPRT
FRNVVEAAYS RTTRTVRKKA YPASLVRKAA HDINNSLSSA LANIQLARRS CTHEEDECRH
LDDAEKSILR ARDHSIQLLE PSLKELEETE GAVKIAPAPP AHPRRSHEKK KGAAAGYRIL
LMDDEEAILS ATSDMLSFLG HTVTVAKSGE DSIEMYRQAY AGDSRFDVVI LDITVPCGIG
AEETLPRLRE IDPNVRAIIS SGYATHPLLV NYAASGFVAA LIKPYGFKEL EESLAQISLR
K