Gene Mboo_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2139 
Symbol 
ID5409957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2211342 
End bp2212259 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content58% 
IMG OID640869384 
ProductGMP synthase subunit B 
Protein accessionYP_001405296 
Protein GI154151678 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAA CAGAGAAGTT CATCCAAAAA TCTGTCGAGG AGATCCAAAA AGAGGCAGGT 
AATGAGAAGG TCGTGATGGC CCTCTCGGGA GGCGTGGACA GCTCGGTCTG CGCAAGCCTT
GCCGCCCGTG CCATCGGGGA TCGCCTTATC CCGATTTATA TCGATACCGG CCTGATGAGA
AAAGGCGAAA CGGAACGGAT AAAGGCGGTC TTTGGCAACA TCCGGCTCCA GGTGGTCGAT
GCCGGTGACG AGTTTGTTGC AGCGCTTGCC GGGATCACCG ATCCCGAGAA GAAGCGCAAA
GCGATCGGGG AGCGATTTAT CCGGGTCTTT GAGCGCGAGG CAAAAAAGTC GGGGGCGACC
TGCCTTTTAC AGGGCACCAT CTACCCGGAT CGGATCGAGA GCGAGGGGGG CATAAAAAGC
CACCACAATG TCGGAGGGAT GCCTGAGCAT ACGGCATTTA AAAAAGTGAT CGAGCCGATC
AGGGATCTGT ACAAGGACGA AGTACGGGAG GTTGCGGGGG CGCTCGGCCT GCCGCCCGAG
ATCCAGCACC GGATGCCTTT CCCCGGCCCG GGACTTGCAG TCCGTATCCT TGGGGAAGTC
ACCAAAGAGA AGGTTGCGGT GATAAGGGAG GCCAACTGGA TCGCCGAGTC GGAGATTGTG
GAGAAGTACC GCCCCTGGCA GTGCTTTGCA GCGCTTATCG GCCTTGGGAC CGGGGTCAAA
GGGGACAATC GGATCCATGG CTGGATCGTT GCGGTCCGGG CCGTGAACTC CCGGGATGGG
ATGACCGCCG ACCCTCTTGA GATCCCGTTT GCGGATCTTG TGAGAATCGG GTCGAGAATT
ACCGCTGAGA TCCCAAGCGT TGCCCGGGTG GTGTACGACA TCACCCCCAA ACCCCCGGCA
ACCATTGAGT ACGAATAA
 
Protein sequence
MVKTEKFIQK SVEEIQKEAG NEKVVMALSG GVDSSVCASL AARAIGDRLI PIYIDTGLMR 
KGETERIKAV FGNIRLQVVD AGDEFVAALA GITDPEKKRK AIGERFIRVF EREAKKSGAT
CLLQGTIYPD RIESEGGIKS HHNVGGMPEH TAFKKVIEPI RDLYKDEVRE VAGALGLPPE
IQHRMPFPGP GLAVRILGEV TKEKVAVIRE ANWIAESEIV EKYRPWQCFA ALIGLGTGVK
GDNRIHGWIV AVRAVNSRDG MTADPLEIPF ADLVRIGSRI TAEIPSVARV VYDITPKPPA
TIEYE