Gene Mboo_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2138 
Symbol 
ID5409956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2210085 
End bp2211236 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content58% 
IMG OID640869383 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_001405295 
Protein GI154151677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA CCGATATAAC GGCGCAGTAC AGGGCGCTTG ATGACCAGTA TTATATGCCT 
GCGTTCTCGC GGAACATGGC GATCGTACGC GGAAAGGGCT CGACCGTCTG GGATGGGGAC
GGGAAGGAAT ATATCGACTG CGTAGCAGGG ATCGCAGTCT GCAGCACCGG TCACTGCCAC
CCCGCAGTGG TAAAGGCGAT CTGCGAGCAG GCACACGAGC TCATCCACTG CTCCAACCTC
TACTATGTCC CCCACCAGGG CGAGATGGCA AAGAAGATCG TTGAGGTAAC GGGCATGAAA
AAGGCGTTCT TCTCGAACTC GGGGGCTGAG GCAAGCGACG GGGCGTTAAA GCTTGCCCGG
GTCCGCACCG GGAAAAAGAA GTTTGTCGCG TTCACCCACG GGTTCCATGG CCGGACGATC
GGATCGCTTG CAGTGACCCA CAAGCCTGCC GCCCGTGAGC CGTTCGAGCC TCTCGGTCTC
CCGACCACGT TTGTGGAGTA CGGGAATCTT GATGCCGTAA AAAAAGCGGT GGATAATGAT
ACTGCGGCGG TGATTGTCGA GCCGATCCAG GGTGAGGCCG GCGTCATCAT CCCCCAGGAC
AGTTTCCTTG AGGGTATCCG GGAGATCTGC GACAGGAAAG GGGCGCTTAT GATTGTCGAT
GAGGTCCAGA CTGGCATGGG CCGGACCGGG AAATGGCTTG CTCTCCAGCA CGCAAAGGTT
CAGCCCGATA TTGTTACGCT TGCCAAAGGT ATTGCAAGCG GCTTTCCCAT GGGTGCCTTT
GCTGCCCGCG ACGGGTTAGA GTTTGGTAAA GGGGAGCACG GAAGTACGTT TGCCGGCGGG
CCTGTTGCCT GCGCAGCAGG GCTTGCAACG ATCAGTGTCC TTGAGCAGAT CCTTCCGGAT
GTAGCCCGCA AGGGCGAGCG GTTCAAAAAA GGGCTTGCGA AGTATCATCC CCGGGTCCGC
GGGCTAATGA TTGGGATCAC GGTCGGGGAG AAGTGCCCCG AGGTACAGGC AGAGTGCCTG
AAAAACGGCG TGCTTGTGAA CTGCGCCGCA GACGGGAACC TCCGGCTTGT CCCGCCTTTA
GTGATCTCGG ATGCCGAGAT TGACCGGGCG GTGAAGGTGA TCGATGGAGC GCTTGGTAAG
GTCGTGCTAT AA
 
Protein sequence
MKNTDITAQY RALDDQYYMP AFSRNMAIVR GKGSTVWDGD GKEYIDCVAG IAVCSTGHCH 
PAVVKAICEQ AHELIHCSNL YYVPHQGEMA KKIVEVTGMK KAFFSNSGAE ASDGALKLAR
VRTGKKKFVA FTHGFHGRTI GSLAVTHKPA AREPFEPLGL PTTFVEYGNL DAVKKAVDND
TAAVIVEPIQ GEAGVIIPQD SFLEGIREIC DRKGALMIVD EVQTGMGRTG KWLALQHAKV
QPDIVTLAKG IASGFPMGAF AARDGLEFGK GEHGSTFAGG PVACAAGLAT ISVLEQILPD
VARKGERFKK GLAKYHPRVR GLMIGITVGE KCPEVQAECL KNGVLVNCAA DGNLRLVPPL
VISDAEIDRA VKVIDGALGK VVL