Gene Mboo_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2118 
Symbol 
ID5411216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2192228 
End bp2193094 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content57% 
IMG OID640869363 
Producthypothetical protein 
Protein accessionYP_001405275 
Protein GI154151657 
COG category[S] Function unknown 
COG ID[COG4022] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR03275] putative methanogenesis marker protein 8 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.955884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA ACGAAGAGAA TGACATCCAT GTGATCGAAG CGATAGGCCG GTCGAAGATC 
GTTATCAAAA ACGGGAATGT GGCAGAAGTC TCAGTCTCAA GACTCCGCCA GTGCCCGCTT
GCAAAAAAAT TTGCCCGGCC CGTAAACGAG ATTACGCAGG ATGAGGTAAA GGCCAACATC
GAGCACCGGA TGGATTCGTG GGGCATGTGC CAGCCGCACC GGAATGTCTG CGGGGCGGTG
GATTTTGTCG GGTTTGGTGC GTCCGAGCTG ATCAGCACCG GCATCCTGTC CGGGAGCCTT
GACGCTGCCG TCCTTGCCTG TGACGGTGCT GGCACAGTGA TCGTGACAAC GCCTGAGATG
GTTCAGGGCA TCGGTGGCAG GATGTCCGGC CTTGTGAGCA CTACACCGCT TGCTGAGGAG
ATGGACCGGA TTGAGCAGGG TGGAGGTATC GTCCTTGACC GCGCAAAAGC CATGGTTGAT
CCGGTGCTCG GGACGGCAAA AGCATATGAG AAGGGATTTA CCCGTGTTGC CGTTACTGTA
GCTTCAGCAG GTACTGCACT GGCGATCCGC GAAAAATTCC CGGAAGCCTT TATTTTCGGC
GTACATTTAA GCGGCATTAC CGAAGAAGAT GCTGAGCGGA TTATCGGGGC TGCGGATATT
GTAACTGCCT GCGCCTCGAG ATGGATCTGG CAGATCGCAG GGGCCCGCGC CCTCCTCCAG
GCAGGTACTG CCGTGCCGGT TTTTGCGCTT ACCAAGCGCG GGAAGCAACT GATTCTCGAC
AAGATTGCGC GGTCGGATCG CCCGGTGCTG GTATCCGGTT CAAAACTTCC GGTCTACGGT
CCGGAACTTC CCGATCCCCT CTTGTAA
 
Protein sequence
MAENEENDIH VIEAIGRSKI VIKNGNVAEV SVSRLRQCPL AKKFARPVNE ITQDEVKANI 
EHRMDSWGMC QPHRNVCGAV DFVGFGASEL ISTGILSGSL DAAVLACDGA GTVIVTTPEM
VQGIGGRMSG LVSTTPLAEE MDRIEQGGGI VLDRAKAMVD PVLGTAKAYE KGFTRVAVTV
ASAGTALAIR EKFPEAFIFG VHLSGITEED AERIIGAADI VTACASRWIW QIAGARALLQ
AGTAVPVFAL TKRGKQLILD KIARSDRPVL VSGSKLPVYG PELPDPLL