Gene Mboo_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2039 
Symbol 
ID5411166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2114379 
End bp2115770 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID640869281 
Producthypothetical protein 
Protein accessionYP_001405196 
Protein GI154151578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.109783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGGG TGCTTGCAGG TATACTCCTG TTGCTGCTCA TAGCGGGCGC GTATGCAGAC 
AATTCAGGCA GTTCCAGCAG TACCTCAGGC ATTTCCGGCA GCAGTTCGTC AGGTACTTCC
AGCAGTTCGT CAACGAGCAC GTCTGCCTCC ACGGTCGATC AGGCAGCGCT GGTCTATGTC
TCCAATGTGA CCACGGACAG CGGGTCGTAT TTCCCCGGCG ATTCCGGGAC GGTCTCGGTC
ACCCTGACCA ATGGCGGGAC AACGGCAATC GGGCTGGAGG ATCCGACCCT GATCAGTCCC
CACCTCGATA TCCAGAAAAG CGACTGGGAG GGCATGACCT ATGTGGGTGC CGGGGATACC
ATCACGTATT CCATCCGGTT CACGGTTCTG CCGCCGGATG GGACGTACGA CGCCCTGTTT
ACGGTCGGGA CACAGGGAGG CAACGCCATC CACTATCCGG TCGAAATCAA CGTAGACTCC
AATAGCCTTC TTGCCGCGGT TACCTCCCAG CCTACCTCAT TTGCACCCGA GGCAGAGCAG
AACGTGACGC TCACCCTGAT GAACACCCGC TGCGGCGCGA TCAACAACAT CGTGATCACA
CCCGAAGGGA CCGGTATTGT TGCCGACCCG GCCATGTACC TCATCCCCGC TCTTGCGTCC
TCCAGTTCGT ACTCGGACAC CTTCGGCATC ACCTCCCACC AGGCATCAAA CCTCACGTTT
AACATCAGTT ACCAGGATGG CGACAACACC CATTACACGG ACGTGGTGCT GCCGATCAAT
ATCGGTGAGG ACAAGACTGC CGCGGTTCCC GTCCTTAACG ATGTGGCACT CACCACCTCA
GGATCGGGAT ATGACATCAC CGGGGATATC ACCAATGCCG GGATCTCGGA TGCCTACGGG
GTGATCGTAA ACGTTGCTTC CCCGGCAACC GGCACCGGGA CCTATCCGGT CTATGCCATT
GGCAGCATCG CCTCCGACGA TTCCGGGACC TTCGAGCTGA CCTTTACGAC AAGCGATCTC
TCCGCCGTGC CCGTGGTCAT TACCTGGAAG GATGCTGCGG GCAACGATTA CAGCCTCACC
AAGACCCTCA ACCTTGGTTC GTCTGCCGGA GCAGCCAACG TAACGGCGGG CAGTGGCTCG
CGGGTGACTT CAGGAACCGG AACGGGCGGG AACTTTAATG GCGGTACCGG AGGCACGAGT
CGTGGCGGCT ATGGCGGAAG TTATGGCGGG CGCAGCAGCA GCAACAGCCT CTTTGGCGGG
ATCACCAGCG GCAGGGGCGC CGGGATTGCG GCATTCTATC CCCTCATTGC CGGTGTCGTG
TTCCTGATTG CAGCGATCGT CCTGTGGACC AAGCGGAAAT GGATCATGAT CAAGCTGAAA
AAACAGCAGT AG
 
Protein sequence
MRWVLAGILL LLLIAGAYAD NSGSSSSTSG ISGSSSSGTS SSSSTSTSAS TVDQAALVYV 
SNVTTDSGSY FPGDSGTVSV TLTNGGTTAI GLEDPTLISP HLDIQKSDWE GMTYVGAGDT
ITYSIRFTVL PPDGTYDALF TVGTQGGNAI HYPVEINVDS NSLLAAVTSQ PTSFAPEAEQ
NVTLTLMNTR CGAINNIVIT PEGTGIVADP AMYLIPALAS SSSYSDTFGI TSHQASNLTF
NISYQDGDNT HYTDVVLPIN IGEDKTAAVP VLNDVALTTS GSGYDITGDI TNAGISDAYG
VIVNVASPAT GTGTYPVYAI GSIASDDSGT FELTFTTSDL SAVPVVITWK DAAGNDYSLT
KTLNLGSSAG AANVTAGSGS RVTSGTGTGG NFNGGTGGTS RGGYGGSYGG RSSSNSLFGG
ITSGRGAGIA AFYPLIAGVV FLIAAIVLWT KRKWIMIKLK KQQ