Gene Mboo_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1976 
Symbol 
ID5410799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2039412 
End bp2040344 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content55% 
IMG OID640869217 
Producthypothetical protein 
Protein accessionYP_001405133 
Protein GI154151515 
COG category[S] Function unknown 
COG ID[COG1665] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.33772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.678453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACCCG TGCTCCCTAT CCGCCTGCGT GATTTTGTTG AGGATCCTGA CGGCTGGATC 
TACGCCGTCT CCACGTATGA CAATGACCGT AATGTCGGGT GTGTTCTCAG GTACGTGCCG
GACAGCCAGG GAGACCGGGT AAACCCGGCC GGCCAGAGGT ACCACAAGTA CGATTTTGAA
GACGCCTATG CGCGGATCGC ACGCGAGAAA CCGGCCTATG CCGGGTTGGT TCAGCGTATA
CCGGTTACCG ATCTGCGCAG GGTATTAAAA CCGGATGTGG AGATTTACCG GATAGCCACA
TCACATGATC GGGTCAGGAA ACTGCTGCAT CTTTTCGACC TCCCCCAGGG AACGATAGGC
TGCACCGGCT CACTCCTGTG CGGTCTCGAT AATGAGACCT CGGATATCGA CATGGTAGTA
TACGGCAGGC ACTGGTTTGA TGCGCAGGCG CAGGTCAAAC GCGGCATTGA CGAGGGAAAG
ATCGAGGGCA TGTCACAGGA TATGTGGCGG AAAGTGTACA AAAAACGTAA ACCGGAAATC
CCCTTTGAGG CCTTTGTGCT TCATGAACAG CGGAAGTGGA ACCGGGGGCA GATCGATGGC
ACCTACTTTG ATATCCTGTA TACCCGGACT TATAATGATT GCAAAGGGGT TCCTGCCGGG
AAAGGCGAAA TCCTGGGAAA AGAGACGATC GAAGCGCGGG TAACCGATGC GTCGCTTGCC
TTTGATAACC CGGCGGTCTA CTCTGTTAAA CATGAATCCG TGAGTAAGGT TCTTTCGTTC
ACGCATACAT ACAGCGGCCA GGCCCTTCCC GGCGAAACCA TCGAAGCCTG CGGCGTAGTG
GAGCAGCACG GACATGAGCG CTGGCTCATT GTTGGCACGA CCCGGGAAGC GCGAGGGGAA
TATATTATAT CAAAAACACT GCTCGGACGG TAA
 
Protein sequence
MVPVLPIRLR DFVEDPDGWI YAVSTYDNDR NVGCVLRYVP DSQGDRVNPA GQRYHKYDFE 
DAYARIAREK PAYAGLVQRI PVTDLRRVLK PDVEIYRIAT SHDRVRKLLH LFDLPQGTIG
CTGSLLCGLD NETSDIDMVV YGRHWFDAQA QVKRGIDEGK IEGMSQDMWR KVYKKRKPEI
PFEAFVLHEQ RKWNRGQIDG TYFDILYTRT YNDCKGVPAG KGEILGKETI EARVTDASLA
FDNPAVYSVK HESVSKVLSF THTYSGQALP GETIEACGVV EQHGHERWLI VGTTREARGE
YIISKTLLGR