| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1962 |
|---|
| Symbol | |
|---|
| ID | 5409999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2025775 |
|---|
| End bp | 2026368 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640869203 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001405120 |
|---|
| Protein GI | 154151502 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1300] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.923141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATT CCGGTGTCCC GACCATCCAG ATGAGATTCC TTTTAAGGAC AACCGCAACG
GTCACCATTC TTATTTTTAT CATCTCCCTG ATTGCAGGAT GGATCGGAAC CCTGCACAAC
CCTGCAATAG GTAACGAGCT CCTTGCCCTC TTCGAGAAAG AGATCGCAGG TCAGATTACG
ATGGATAACC CGGCTAACAT GTGCATGATG ATCTTTGCAA ATAACCTCGA AGCCTGCATC
CTGCTCTTTC TGGGGGGGGC CACATTCGGC ATCCTGACGC TCATAATCCT GAGCCTGAAC
GGGATCGTAA TCGGTGCAGT CACCGAGATC ATCAGCAAAG GGCATTCCAT ACTCTTTATT
GCCGCCGCCA TCATCCCCCA TGGAATCTTC GAGATCCCCG CATTCATTAT CGCATCCACG
CTTGGATTCT GTATGGCACA GTCGCTGATC GCAGAGTGGT ACGGGGTTGC CGATACCGCG
GCCGATGCCC AGCGGTTCGC CCGGCTGTTT CTCTTGTATG TATTGCCCCT TATCACCGTC
GCAGCAATTG TCGAGGCTTT TATTACGCCG GCAATCATAC AAATGGTAGC ATAA
|
|---|
| Protein sequence | MSDSGVPTIQ MRFLLRTTAT VTILIFIISL IAGWIGTLHN PAIGNELLAL FEKEIAGQIT
MDNPANMCMM IFANNLEACI LLFLGGATFG ILTLIILSLN GIVIGAVTEI ISKGHSILFI
AAAIIPHGIF EIPAFIIAST LGFCMAQSLI AEWYGVADTA ADAQRFARLF LLYVLPLITV
AAIVEAFITP AIIQMVA
|
|---|
| |