| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1932 |
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| Symbol | |
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| ID | 5411017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1995752 |
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| End bp | 1998391 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869171 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001405090 |
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| Protein GI | 154151472 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.413115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCC CAAAGAGAAT TGGAAAAATC GAGTTCGGCC TGCTCTCCCC AAAGGAGATC
CGGGAAATGA GTGTCAGGAA GATTATCTGG GCAGATACCT ACGATGATGA TGGTTTCCCG
TATCCGCAGG GGCTCATGGA CCTCAACCTC GGGGTTATCG ACCCGGGGCT CCGGTGCAAG
ACCTGCGACC AGAAGGCCAG CGATTGCCCG GGGCATTTCG GGCACATCGA GCTCGCCAAA
CCGGTCATCC ATGTAGGCTA CACGCGCTTG ATCAGAAAAC TCCTCCGTGT CACCTGCCGG
TCCTGTGGCC GCCTGCTTCT CTCCCCTGAT GAAGTCGAGA AGGTAGTCGG GACGGACGAG
GACCTCACCG GAGACCAGAT CTCGGAGAAG GACGTGAAAA AAGAGCGCGT CTGCCCCCAC
TGCGGCGAAC AGCAGCTCAA GATCAACTTC GAGAAGCCCA CAACCTTCTC CGAAGTGATG
ATCGAGGATG GCAAGAAAGT CGAGCACAAG CTCACACCCG CGGATATACG GGCGCGCCTC
GAAAAGATCC CAGATGAGGA TCTCATACCG CTTGGGATCA ACCCCCGGGT GGCCCGCCCG
GAATGGACTA TCCTCACGGT GCTCCCGGTG CCCCCGGTTA CGATGCGCCC CTCCATTATC
CTTGAGAATG GGCAGCGATC GGAAGACGAC CTCACCCACA AGCTCGTGGA TATTATCCGT
ATCAACCAGC GTTTCAAGGA GAACCAGGAC GCCGGTGCAC CCCAGCTGAT TATTGAGGAT
CTCTGGGAAC TGCTTCAGTA CCATGTCACT ACCTACCTTG ACAACGAAGT TGCCGGTTGC
CCACCGGCAC GGCACAGGAG CGGTCGGCCC TTAAAGACCC TGTCCCAGCG GCTCAAGGGG
AAAGACGGGC GGTTCCGTGG CTCGCTTTCG GGTAAGCGTG TGAACTTCTC AAGCCGTACC
GTTATCTCGC CCGATCCCAA TCTCTCGGTG ACGGAAGTAG GCGTTCCGCG TGCGGTTGCA
AACGAAATGA CGATCCCCGT CAGGGTCACA CCCTATAATC TCGAGGAACT CAAGCAGATT
GTCAGGAACG GCCCGATCCG TTCCAGTGTC AATGCTCCCT GCGGCGCAAA CTATGTCATT
CGTCCGGACA ATCGCCGTCT CCGTCTGGGT GCAGATAATC TGGATACTGT CGCCGACATG
ATTGAAACCG GCTGGACGGT TGAACGCCAG CTCCGCGACG GCGACATTGT CCTCTTCAAC
CGGCAGCCCT CACTGCACCG CATGAGTATT ATGGCCCACC GGATCAAGGT TATGGAAGGC
AGGACCTTCC GGCTTAACCC GGCTGTCTGC CCGCCCTACA ACGCCGACTT TGATGGCGAT
GAGATGAACC TCCATGTTCC CCAGACTGAG GAAGCCCGGG CAGAGGCATC GATTCTCTGC
TCCGTTCAGG AGAATATCCT CTCTCCCCGG TTTGGCGGTC CGATCATTGG CGGTATCCAC
GACCACATAT CCGGCATCTT CATGCTGACC CATGACATGC GCTGGTTCAC CAAAGAAGAG
GCGCTCTATC TTTTAAAGCC TGTCAGGGTC GATCACATGC CCCCGCCCGG TAAGACCGAG
AATGGGATCG AATACTGGAG CAACAAGCAG GTATTCTCGC AAATCCTGCC GACAGCGCTC
AACATGGTCT TCCATGCCAG CTCCTGCCAG AACTGTGACA CCTGCAAAAA GGAGCTCTGC
GAGCGTGACG CTTATGTCCG CATTATGGGG GGCCGGCTTG AATCCGGTAC CATCGATAAG
AAAGCAATCG GTGCATTTGA CGGCCAGATC GTTAACCGGA TCATTCGCCA GTACGGCATG
AAGCGGGCGA CTGAGTTTAT TGATCAGGTT ACGAAGCTTT CTATCCGTGG AATTATGATA
GACGGTTTCT CGTTCGGTAT CGATGACGAA GATCTCTCCA AGACCGAGTA CGGCCAGATC
GACGATGTTC TGAATACTGC CGCACTTGAT GTCTCCCGCA GGATTAAGAT CTACGAGGAC
GGCCAGCTCG AACCGATGCC CGGGCGTACT GTCGAGGAAA CCCTCGAGAT GCAGATTATG
CAGGTGCTTG GGAAAGCTCG TGACCAGACC GGTCAGATTG CGGGCCGACA CCTTGGTCTT
GGGAACAGTG CCGTGGTAAT GGCGGTCTCA GGCGCCCGTG GTTCGATGCT GAACCTGACC
CAGATGGCTG GTTGTATCGG CCAGCAGTCT GTCCGTGGTG AGCGTATCGT CCGTGGGTAT
GATGACCGTA CCCTCCCGCA CTTTAAAAGA GGTGACCGGG GTGCTGATGC ACACGGATTT
ATCGCGCACA GCTACAAGGG TGGCTTAAAT CCGACCGAGT TCTTCTTCCA TGCTATCGGT
GGCCGTGAAG GTCTCGTGGA TACAGCCGTT CGTACGTCCC AGAGCGGGTA CCTCCAGCGG
CGTATGATTA ACGCACTTCA GGATCTCAAG GTCGCGTACG ACGGTACTGT CAGAACGACC
GGCGGCAGGA TCATCCAGTT CCAGTACGGA GAGGACAGCA CCGACCCCAC GAAGAGCGCT
TTTGGCGACC CGGTGGATGT CAAAGGCATT GTTGAAGCCG TGCTCAAGGA GGAAGTCTGA
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| Protein sequence | MPSPKRIGKI EFGLLSPKEI REMSVRKIIW ADTYDDDGFP YPQGLMDLNL GVIDPGLRCK
TCDQKASDCP GHFGHIELAK PVIHVGYTRL IRKLLRVTCR SCGRLLLSPD EVEKVVGTDE
DLTGDQISEK DVKKERVCPH CGEQQLKINF EKPTTFSEVM IEDGKKVEHK LTPADIRARL
EKIPDEDLIP LGINPRVARP EWTILTVLPV PPVTMRPSII LENGQRSEDD LTHKLVDIIR
INQRFKENQD AGAPQLIIED LWELLQYHVT TYLDNEVAGC PPARHRSGRP LKTLSQRLKG
KDGRFRGSLS GKRVNFSSRT VISPDPNLSV TEVGVPRAVA NEMTIPVRVT PYNLEELKQI
VRNGPIRSSV NAPCGANYVI RPDNRRLRLG ADNLDTVADM IETGWTVERQ LRDGDIVLFN
RQPSLHRMSI MAHRIKVMEG RTFRLNPAVC PPYNADFDGD EMNLHVPQTE EARAEASILC
SVQENILSPR FGGPIIGGIH DHISGIFMLT HDMRWFTKEE ALYLLKPVRV DHMPPPGKTE
NGIEYWSNKQ VFSQILPTAL NMVFHASSCQ NCDTCKKELC ERDAYVRIMG GRLESGTIDK
KAIGAFDGQI VNRIIRQYGM KRATEFIDQV TKLSIRGIMI DGFSFGIDDE DLSKTEYGQI
DDVLNTAALD VSRRIKIYED GQLEPMPGRT VEETLEMQIM QVLGKARDQT GQIAGRHLGL
GNSAVVMAVS GARGSMLNLT QMAGCIGQQS VRGERIVRGY DDRTLPHFKR GDRGADAHGF
IAHSYKGGLN PTEFFFHAIG GREGLVDTAV RTSQSGYLQR RMINALQDLK VAYDGTVRTT
GGRIIQFQYG EDSTDPTKSA FGDPVDVKGI VEAVLKEEV
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