| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1927 |
|---|
| Symbol | |
|---|
| ID | 5411012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1992325 |
|---|
| End bp | 1993053 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640869165 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001405085 |
|---|
| Protein GI | 154151467 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1938] Archaeal enzymes of ATP-grasp superfamily |
|---|
| TIGRFAM ID | [TIGR00161] conserved hypothetical protein TIGR00161 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.655814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCG AATCTTCTCA CGACCTCATG ATATTTGCCA ACCCCCCACC GGGCGAGGGC
GCTGCGGTTC TGATGGGATT CCCCGGGAGC GGCCTTGTGG GCACAATCGC CCTCCAGTAC
ATGGTCGATC AGCTCGAATT CGATCTGGTC GGCACGATGA CCTCCCGGTA CTTCCCTCCT
CTCGCCATGA TGAACAAAGG CGTTGTCAAC GATCCCGTAC GGTTGTACAT GAAAAACGAT
ATTGCTGCTA TCGTGGCCGA TATCCCTATT CACCCTATGA TCTGCTACGA GATCTCGACA
GGTATTCTCG ACTGGCTTGC CCCCTTAAAG CCTAAGGAGG TGCTCACGAT TGCCGGGATA
GTCACCAACG AGTCGGAAAA ACGGGTCTTT GGCGTTGCAA CGACTCCCGA AGCACTCACC
CGGATCCAGG ATCACACCCT CGTCCTCCCA ATCGGGAGTA TTTCGGGGAT CGCTTCGAGT
ATTCTCACGG GATGCAAGAT CCGGAATATC CCGGGGTACG GCCTCTTGGG CGAAACGGTA
AATGCGCCCG ACCCGCGATC CTCTGCAGCA ACTATCGAGG TACTCAACAA GATGTACAAT
CTGGGCCTCG ATATCAAGCC ACTCCTTGAG CAGGCCGAGG AAATTGAGCA GAGTATGCAC
CGGATCTCAG AAGAGGTCCA GCAGTCCGCA GATACCTCGC CCAAAAAAGA TCTGCCAATG
TACGGGTGA
|
|---|
| Protein sequence | MTPESSHDLM IFANPPPGEG AAVLMGFPGS GLVGTIALQY MVDQLEFDLV GTMTSRYFPP
LAMMNKGVVN DPVRLYMKND IAAIVADIPI HPMICYEIST GILDWLAPLK PKEVLTIAGI
VTNESEKRVF GVATTPEALT RIQDHTLVLP IGSISGIASS ILTGCKIRNI PGYGLLGETV
NAPDPRSSAA TIEVLNKMYN LGLDIKPLLE QAEEIEQSMH RISEEVQQSA DTSPKKDLPM
YG
|
|---|
| |