Gene Mboo_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1921 
Symbol 
ID5410119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1984121 
End bp1984501 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content55% 
IMG OID640869159 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001405079 
Protein GI154151461 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCC GATCTCCTGT GGTATTGATG GTCGGCGTTC TTTGTGTGTT TGCTGCACTG 
ATATGTATTG CAGGCTGTGC CGGTTCGCCA CCCCCATCCC GCCCGTCAAC ACCTCTGTAT
ACCCCGCAGA CCACAATCCT GATCGGGAGC GCAGGTGTCA ATCCCCAGGT TCTGGTGGTG
GATAAGGGGG TGACGGTTAC CTGGCTCAAC CTTGATATGG GTGTCCATAC GGTCACCTCC
GATGCATCAG ATCCCGATTC CTTCACCTCA CCGCCCCTGG TAAATAACAG CCGGTACCAG
TTCACGTTCA CGATCCCGGG GACGTATGGT TACCACTGCA CGGATAACCC GTCAATAAAA
GGAACGGTAA TCGTCCACTG A
 
Protein sequence
MQPRSPVVLM VGVLCVFAAL ICIAGCAGSP PPSRPSTPLY TPQTTILIGS AGVNPQVLVV 
DKGVTVTWLN LDMGVHTVTS DASDPDSFTS PPLVNNSRYQ FTFTIPGTYG YHCTDNPSIK
GTVIVH