Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1914 |
Symbol | |
ID | 5410112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1976811 |
End bp | 1977422 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640869152 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001405072 |
Protein GI | 154151454 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.19709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGC AGGAGCTGCT GGAGAATATT CTGAAGGGTG CGAAATACCT GGGTACTTTT TCCCTCACCG ATATGCTTGC GTTCGCTGCA TCCCGTCGCC TGCATGCCCT TGCTGTAGCA AAGGAAGGAA ACAAGCAGTT CTATCTTGCT TTTCTCAACG GGGAACCGGA AGGGGCAATC TATATCGACT CCGAGGGAGC GCTCTATGGC GACAAAGCAG TTGTCTATAT CCGGGAGGGC CGGCAGTATG TTCTCTGCGA TGTCAAACCG GAGATTATCG ATGCGCTTGT CATGGGGTGC CGGATCTTTG AGAAGGGGCA CATCCGAAAG AATATCACGT ATTCGGTACC GGAGATCGGC AAGAAGAGTG AGGGCCTCGG GGTTGTCACG CTCACGGTCC GTCGGGAAAA AATGCCGCAG AACGGCGTAC GGGTATCGAT CCGGAAAGAT GGTAAGATTG TGGGAAGCGA TGTCACGACC GGTAACGGAA CGGTCAGTTT TCGGGTGATG TACGGCACCT ACACCTGTAT TGTCCAGGAC CGGTCCCAGG TTGTGACCCG TTTTACTATT AATTTTGATG AAGCGCACCC TTCCCATATT CTGGATCTCT GA
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Protein sequence | MDLQELLENI LKGAKYLGTF SLTDMLAFAA SRRLHALAVA KEGNKQFYLA FLNGEPEGAI YIDSEGALYG DKAVVYIREG RQYVLCDVKP EIIDALVMGC RIFEKGHIRK NITYSVPEIG KKSEGLGVVT LTVRREKMPQ NGVRVSIRKD GKIVGSDVTT GNGTVSFRVM YGTYTCIVQD RSQVVTRFTI NFDEAHPSHI LDL
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