Gene Mboo_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1914 
Symbol 
ID5410112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1976811 
End bp1977422 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID640869152 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001405072 
Protein GI154151454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.19709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC AGGAGCTGCT GGAGAATATT CTGAAGGGTG CGAAATACCT GGGTACTTTT 
TCCCTCACCG ATATGCTTGC GTTCGCTGCA TCCCGTCGCC TGCATGCCCT TGCTGTAGCA
AAGGAAGGAA ACAAGCAGTT CTATCTTGCT TTTCTCAACG GGGAACCGGA AGGGGCAATC
TATATCGACT CCGAGGGAGC GCTCTATGGC GACAAAGCAG TTGTCTATAT CCGGGAGGGC
CGGCAGTATG TTCTCTGCGA TGTCAAACCG GAGATTATCG ATGCGCTTGT CATGGGGTGC
CGGATCTTTG AGAAGGGGCA CATCCGAAAG AATATCACGT ATTCGGTACC GGAGATCGGC
AAGAAGAGTG AGGGCCTCGG GGTTGTCACG CTCACGGTCC GTCGGGAAAA AATGCCGCAG
AACGGCGTAC GGGTATCGAT CCGGAAAGAT GGTAAGATTG TGGGAAGCGA TGTCACGACC
GGTAACGGAA CGGTCAGTTT TCGGGTGATG TACGGCACCT ACACCTGTAT TGTCCAGGAC
CGGTCCCAGG TTGTGACCCG TTTTACTATT AATTTTGATG AAGCGCACCC TTCCCATATT
CTGGATCTCT GA
 
Protein sequence
MDLQELLENI LKGAKYLGTF SLTDMLAFAA SRRLHALAVA KEGNKQFYLA FLNGEPEGAI 
YIDSEGALYG DKAVVYIREG RQYVLCDVKP EIIDALVMGC RIFEKGHIRK NITYSVPEIG
KKSEGLGVVT LTVRREKMPQ NGVRVSIRKD GKIVGSDVTT GNGTVSFRVM YGTYTCIVQD
RSQVVTRFTI NFDEAHPSHI LDL