Gene Mboo_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1889 
Symbol 
ID5410731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1954997 
End bp1955311 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content60% 
IMG OID640869127 
ProductRNAse P, Rpr2/Rpp21 subunit 
Protein accessionYP_001405047 
Protein GI154151429 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2023] RNase P subunit RPR2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.475377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACA AAAAGCGCCC CCCCTCCGTA AAACCCCTGG CACGGGAGCG CATCGCGGTG 
CTTTTCTCCG AAGCAGAAAA GATATTCCAC GAAAATCCCG GTTACAGCGA CCGGTACGTG
GCCCTGGCCC GGAAGATCTC CATGAAGGAG CGGGTGCGGA TCGATCACGA ATACCGCCGC
AGGTTCTGCC ACCATTGCTC GCGGTACCTG GTCCCGGGGG CGAACATGAG AGTGCGGGTG
CACCACGGAT GGGTGGCGGT CACCTGCCTT GGATGCAAAA AAACAACCCG GTACCGGGTG
GAGAGAACCC CATGA
 
Protein sequence
MKDKKRPPSV KPLARERIAV LFSEAEKIFH ENPGYSDRYV ALARKISMKE RVRIDHEYRR 
RFCHHCSRYL VPGANMRVRV HHGWVAVTCL GCKKTTRYRV ERTP