Gene Mboo_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1888 
Symbol 
ID5410730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1954749 
End bp1954976 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content57% 
IMG OID640869126 
Producthypothetical protein 
Protein accessionYP_001405046 
Protein GI154151428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.456181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACC TCAAGCCCAC GGTCTGGATA GGAAAGCAGG GCTGCACGGA AGCAACGATC 
GACGAGATTA CGGCCCAGCT CAAGAAGCGC AAGGTGATCA AGGTAAAATG GCTCCAGAAT
ACCGAGGTCG ACCCGGAAGC CGTGGCAGAA GCAGCATGCG CGGCGCTTGT CGGGGTCAGG
GGAAAGACCA TGATCCTTGC ACAGCGCGGA AAACCGACGA AGAAATAA
 
Protein sequence
MQDLKPTVWI GKQGCTEATI DEITAQLKKR KVIKVKWLQN TEVDPEAVAE AACAALVGVR 
GKTMILAQRG KPTKK