Gene Mboo_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1848 
Symbol 
ID5411849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1926168 
End bp1927283 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content59% 
IMG OID640869085 
Productsmall GTP-binding protein 
Protein accessionYP_001405006 
Protein GI154151388 
COG category[R] General function prediction only 
COG ID[COG1163] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTA GTCTTGAAGA GCAGATAGCC GAACTGGAAG CGGAGCTGGT AAAGACTCCG 
TACAACAAGG CTACATCCAA GCACATCGGG CGGGTTAAGG CAAAGATAGC CAAGCTCCGC
GATGAAGCCG TTAACCGTGC GATGAAATCG GGCGGTGGCG GGGAAGGCTA CTCAGTCAAG
AAGTCCGGCG ATGCAACTGC GGTGCTTGTC GGTTTCCCGT CCACGGGTAA ATCCACACTC
TTAAATAAGC TCACCGGTAC CGACAGTGCC GTGGCCGCGT ATGCGTTTAC CACGCTTACG
GTGGTGCCCG GCGCCCTTGA ACACAAAGGG GCGAAGATCC AGCTGCTCGA TATCCCGGGA
CTTATCGCCG GTGCTGCCAT GGGGAAGGGG CGCGGCAAGG AAGTCATCGG TGTCGTGCGG
AGCGCCGACA TCATCATCAT CCTTGTGGAT GTCTTCAACG AGCGGCATGT CGAAGTGCTC
TTAAAAGAAC TCTACGATGC GGGTATCCGG ATCAACGTGC CAAAACCCGA TATCACCATC
AAGAAATCCT CTGTCGGCGG GATCCGGCTC GCGGCTGTCG GGACCCTGGA TCTCGATATC
GATGATGTGC GATCGATCCT CTCCGAGAGC AAGATGATGA ACGCCGATGT GCTCATCAGG
GGGAACGCCT CCCAGGACGA CCTTATCGAT GCCCTCCAGG GGAACCGCGT GTACGTTCCC
GCTTTTATTG CGGTCAACAA GGTGGACCTC GTGGATAAGG AGCGGTACCT GGAGATCGAG
CACGATATCG CGGCCCGGTT CGCAAACCCG CCCATCATGA TCTCCGCCCA TGCAGGGTAC
CACATGGAGG AGCTCAAGGA CGCGATCTAC GACTGCCTCG GTTTCATGCG GGTCTACTTA
AAACCCCAGA GCGGCGAGGC CGATCTCGAA GAGCCGCTCA TCATCCGGAC GGGAAGCACG
GTCGAGACGG TCTGTACCAA GCTCCACCGG GACTTCGTGC GCCGGTTCCG GTACGCCCGG
ATCTGGGGCG ACTCGGTCAA GCACGGCGGC CAGAGGGTAG GCCTCACCCA CCCGCTTCTT
GATGGTGATA TCCTCACCAT CATCATCGAG CACTAG
 
Protein sequence
MAGSLEEQIA ELEAELVKTP YNKATSKHIG RVKAKIAKLR DEAVNRAMKS GGGGEGYSVK 
KSGDATAVLV GFPSTGKSTL LNKLTGTDSA VAAYAFTTLT VVPGALEHKG AKIQLLDIPG
LIAGAAMGKG RGKEVIGVVR SADIIIILVD VFNERHVEVL LKELYDAGIR INVPKPDITI
KKSSVGGIRL AAVGTLDLDI DDVRSILSES KMMNADVLIR GNASQDDLID ALQGNRVYVP
AFIAVNKVDL VDKERYLEIE HDIAARFANP PIMISAHAGY HMEELKDAIY DCLGFMRVYL
KPQSGEADLE EPLIIRTGST VETVCTKLHR DFVRRFRYAR IWGDSVKHGG QRVGLTHPLL
DGDILTIIIE H