Gene Mboo_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1823 
Symbol 
ID5411039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1904246 
End bp1904809 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID640869060 
Productribonuclease P-related protein 
Protein accessionYP_001404982 
Protein GI154151364 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1369] RNase P/RNase MRP subunit POP5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC GCCCCCCTAC GCTCCGGGAA AAGAAACGGT ACGTGCTTGC CCGGATCGAT 
CCGGCCGGTA TATCTCCCGA TCCAAAAGAC CTGTATTACG CGGTGTACGA GGCAGTAGTC
TCGCTGTTTG GCGACATGGC CGCGGCAGCA ATGCAGCCCT CCGTGCTTTC GGTGGAGAAG
GGCTGCGTTA TCCTGCGTTG CCGCCGGGGT GCCGAGCGGG AATTTGCGAT TGCCCTTTCC
ACGCTCTCCG GTTGCCGGGA CACCTTGCTC ACCCTCCGCG TTCTTGCCGT CTCGGGCACC
ATCGAGAGCC TGCGGGAGCG GATCGCGGAA ATCGCATCCC GGAAAGATCC CGGGGACCGC
CCAAAAGATG TGGTTTTACC TTCAGCAGAA GGGACAAGCG AACCTTCCCT GTACCGGTTC
GGTTCCGAAC CGGTTGACAT AATCGTATGG GACGGTCGCA AGGTTGATGC ATTAGAAAAG
GGATTTAAAA ATGCACGCCG ATTGTTCTTA ACAACTGAGG ATCTGGAGAT TATACATGCA
ACCACAATAC CAGATGGGCT ATGA
 
Protein sequence
MSIRPPTLRE KKRYVLARID PAGISPDPKD LYYAVYEAVV SLFGDMAAAA MQPSVLSVEK 
GCVILRCRRG AEREFAIALS TLSGCRDTLL TLRVLAVSGT IESLRERIAE IASRKDPGDR
PKDVVLPSAE GTSEPSLYRF GSEPVDIIVW DGRKVDALEK GFKNARRLFL TTEDLEIIHA
TTIPDGL