Gene Mboo_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1790 
Symbol 
ID5410106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1871657 
End bp1872079 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content59% 
IMG OID640869025 
Producthypothetical protein 
Protein accessionYP_001404949 
Protein GI154151331 
COG category[S] Function unknown 
COG ID[COG4048] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.694142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGTT ACACGTTTTG CGAAACAGCG GAGGCAGCAG ATCTTGAACC GGTGGTTCTT 
GCCATCCACG AGATCATCCA CCGCCTGCCG GTGACGGCAA AATCGCTCCA GAAGCCCGGG
ATCCGGATCG AGGATGGCAG GGTAGTCGAC CGCAATTATA CGGGTCCGGT GCTCGAACAG
GCCATTGCGA CAAACCGGGT GATCAAAACC ACTCCTGAGA ATGGTGCGTA CAAGGGAGTG
CCGGTAACCG TTGCTCCCAT CCGCGATCAC GAGGGAAAGG TGATCGGGGC GCTTGGGGTG
GTGGATGTGA CCGGGATCTT CGATCTTGCT ACGCTCATGG AGGACCAGTC CGCGATCATC
AAGCAGGTCT GCGGAAAGGA TCCCTGCCCG CTGCCTGAAG AGGCCAGTGA TTCCCGGAGG
TGA
 
Protein sequence
MHRYTFCETA EAADLEPVVL AIHEIIHRLP VTAKSLQKPG IRIEDGRVVD RNYTGPVLEQ 
AIATNRVIKT TPENGAYKGV PVTVAPIRDH EGKVIGALGV VDVTGIFDLA TLMEDQSAII
KQVCGKDPCP LPEEASDSRR