Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1653 |
Symbol | |
ID | 5410562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1730371 |
End bp | 1731246 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868887 |
Product | hypothetical protein |
Protein accession | YP_001404813 |
Protein GI | 154151195 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.850435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0303841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA CCGCACCATC TCTTGCAAGG ATCGCCCGTC TCCAGAGAAA TGAGATTACC GAACACCATA TTTACCAGAG GATCGCGCAG GTGACCCCGG ATCCTCACAA CCGTGAGGTC CTGCTCCGCA TTGCCGGGGA AGAAATCCGG CATTATGCCA CCTGGAAGCA CTATACCGGC CGGGACATCG CCCCCAACCT CCTCCGGATC TGGTTTTACT ACCTTATTGC CCGGTTGCTC GGGATGACCT TTGCCATAAA ACTCATGGAG GGGGTGGAGC AGGGAGCGCA GATCGGAGAT CCCGCGCTCC TCTCCGCAAT ACCCGAACTA CCGGCGATGC TTGCCGATGA GGCAAAGCAC GAGAGGGAAC TTATCGCCCT CATCGATGAG GAACGACTGA AGTACGTGGG CTCGGTGGTC CTGGGCCTCA ACGACGCGCT TGTGGAGTTC ACCGGTACCC TTGCCGGCCT GACATTTGCG ATCCAGGATT CACGCATTAT CGCGGTTGCC GGGCTGATTA CCGGTGTTGC CGCATCCCTC TCCATGGCTG CATCCGAATA TCTCTCGCAG CGGTCTGATG AGTCAGCCGG GACCAGTCCG AAAAAGGCCG CATTTTATAC CGGTATTACC TATATCGCGA CCGTTGCCCT GCTGATCCTT CCGTTCCTCC TTCTTGCAAG CCCATACGTG GCGCTGGTCT TCACTCTTGT CGGTGCAGTG CTGGTCATCT TTGTGTTCAC CTTCTATATT GCGGTGGCAA AAGATCTCCC CTTTTGGCGG CGTTTTGCCG AGATGGCTGC GATCAGCCTG GGGATTGCGG CGATCTCCTT TGTCATAGGG CTCCTGATCC GGGTGCTGCT GAACGTGAAC GTATGA
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Protein sequence | MTLTAPSLAR IARLQRNEIT EHHIYQRIAQ VTPDPHNREV LLRIAGEEIR HYATWKHYTG RDIAPNLLRI WFYYLIARLL GMTFAIKLME GVEQGAQIGD PALLSAIPEL PAMLADEAKH ERELIALIDE ERLKYVGSVV LGLNDALVEF TGTLAGLTFA IQDSRIIAVA GLITGVAASL SMAASEYLSQ RSDESAGTSP KKAAFYTGIT YIATVALLIL PFLLLASPYV ALVFTLVGAV LVIFVFTFYI AVAKDLPFWR RFAEMAAISL GIAAISFVIG LLIRVLLNVN V
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