Gene Mboo_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1653 
Symbol 
ID5410562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1730371 
End bp1731246 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content57% 
IMG OID640868887 
Producthypothetical protein 
Protein accessionYP_001404813 
Protein GI154151195 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.850435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0303841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA CCGCACCATC TCTTGCAAGG ATCGCCCGTC TCCAGAGAAA TGAGATTACC 
GAACACCATA TTTACCAGAG GATCGCGCAG GTGACCCCGG ATCCTCACAA CCGTGAGGTC
CTGCTCCGCA TTGCCGGGGA AGAAATCCGG CATTATGCCA CCTGGAAGCA CTATACCGGC
CGGGACATCG CCCCCAACCT CCTCCGGATC TGGTTTTACT ACCTTATTGC CCGGTTGCTC
GGGATGACCT TTGCCATAAA ACTCATGGAG GGGGTGGAGC AGGGAGCGCA GATCGGAGAT
CCCGCGCTCC TCTCCGCAAT ACCCGAACTA CCGGCGATGC TTGCCGATGA GGCAAAGCAC
GAGAGGGAAC TTATCGCCCT CATCGATGAG GAACGACTGA AGTACGTGGG CTCGGTGGTC
CTGGGCCTCA ACGACGCGCT TGTGGAGTTC ACCGGTACCC TTGCCGGCCT GACATTTGCG
ATCCAGGATT CACGCATTAT CGCGGTTGCC GGGCTGATTA CCGGTGTTGC CGCATCCCTC
TCCATGGCTG CATCCGAATA TCTCTCGCAG CGGTCTGATG AGTCAGCCGG GACCAGTCCG
AAAAAGGCCG CATTTTATAC CGGTATTACC TATATCGCGA CCGTTGCCCT GCTGATCCTT
CCGTTCCTCC TTCTTGCAAG CCCATACGTG GCGCTGGTCT TCACTCTTGT CGGTGCAGTG
CTGGTCATCT TTGTGTTCAC CTTCTATATT GCGGTGGCAA AAGATCTCCC CTTTTGGCGG
CGTTTTGCCG AGATGGCTGC GATCAGCCTG GGGATTGCGG CGATCTCCTT TGTCATAGGG
CTCCTGATCC GGGTGCTGCT GAACGTGAAC GTATGA
 
Protein sequence
MTLTAPSLAR IARLQRNEIT EHHIYQRIAQ VTPDPHNREV LLRIAGEEIR HYATWKHYTG 
RDIAPNLLRI WFYYLIARLL GMTFAIKLME GVEQGAQIGD PALLSAIPEL PAMLADEAKH
ERELIALIDE ERLKYVGSVV LGLNDALVEF TGTLAGLTFA IQDSRIIAVA GLITGVAASL
SMAASEYLSQ RSDESAGTSP KKAAFYTGIT YIATVALLIL PFLLLASPYV ALVFTLVGAV
LVIFVFTFYI AVAKDLPFWR RFAEMAAISL GIAAISFVIG LLIRVLLNVN V