| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1635 |
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| Symbol | |
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| ID | 5412276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1712353 |
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| End bp | 1713477 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868869 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404795 |
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| Protein GI | 154151177 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.143018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00206871 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCGC ACTCTGATCC CGGGCGGGAT CGTACCGCCC TGCGGGAGCG GATCATCGGG
ATGGGGGAGA CCTCGCTTCA CAAAAGTTAC TATCCCCTCC TCCAGCAGCG GCTTGCAGAC
CTTGAACGGT TCCGGGCCCT AATCGATGAA ACCAATGAGA TGATCCTTGT AGTACAGACC
CCCGGGAACC GGTGCGTGGA TGCCAATCAT GCCTGTACTG TCCAGCTGGG CTACACCATT
GCACAGCTGC AGGACATGGA TATCTTTTCC CTTGTTGCTT TGACAAAACG AGAGCAGTTC
CGGAAGGTGT TTGCCCAGGC AGCTGCCACC CGTGCCCAGG AAAAGATCGA GACCGATCTT
TTTACCTCAC AGGATAAGGT GATCCCGGCG GAGATCCTGA TACGTTTTGT GACGTTTGAC
CGGCAGATAT ACGGGGTCAT TGTAGCCCGC GACATCAGCG AGCGGATCCG GTACGAGCGG
GAGCTTGTAG CTACCCAGAA AAAACTTAAC CTCATAAACT CCCTGGCCCG TACCGATGTC
AAGAGCCAGA TCTTTATTGT CCGGGCATAT CTTGATGTGC TCCGGCAGAT CGCAAAACAT
CCTGAGGAGA CTGCAATCCT GGACAAGCTC CGGGATACAA CCGGGGAGAT CCAGAACCAT
ATCGAACTTG CAGAGAATTA CCAGAAACTG GGGCTGCATG CACCGCGATG GCAGAACTTT
AACGAAGTGC TGCTCTATGC CATCTCCCAT ATTCCCCCGA TCCTCCTTAC TCGTACAACG
GGAATGGACC GGCTGGAAAT CCTTGCGGAT CCTCTTCTTG AAAAGGGGCT TACCCACCTG
ATGGAATATC TCTACGCCTC CGGCGGGATT GCAGAACCGG TGAGGATCTC TTTTCAGGAA
AACGAAGGAG GTCTTGTCAT TTCCCTGGAG AAAACGGGAA CCGGTATCCC GGCGGTCCAG
AAGGAATCCC TGTTTGTCTG GGCTCCTGCA AAAACCACCG GCCCAAACCT TTTCTTTATC
CGGGAAATTC TTGATATAAC CGGGATAGGG ATCAAAGAGA CCGGCGATCC GGCAATGCTC
TGTTTTGAGA TCCGTGTACC CAAAGGGGGG TACCGGTTTT CCTAA
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| Protein sequence | MNPHSDPGRD RTALRERIIG MGETSLHKSY YPLLQQRLAD LERFRALIDE TNEMILVVQT
PGNRCVDANH ACTVQLGYTI AQLQDMDIFS LVALTKREQF RKVFAQAAAT RAQEKIETDL
FTSQDKVIPA EILIRFVTFD RQIYGVIVAR DISERIRYER ELVATQKKLN LINSLARTDV
KSQIFIVRAY LDVLRQIAKH PEETAILDKL RDTTGEIQNH IELAENYQKL GLHAPRWQNF
NEVLLYAISH IPPILLTRTT GMDRLEILAD PLLEKGLTHL MEYLYASGGI AEPVRISFQE
NEGGLVISLE KTGTGIPAVQ KESLFVWAPA KTTGPNLFFI REILDITGIG IKETGDPAML
CFEIRVPKGG YRFS
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