| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1546 |
|---|
| Symbol | |
|---|
| ID | 5410662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1617044 |
|---|
| End bp | 1617568 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640868780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001404706 |
|---|
| Protein GI | 154151088 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.27867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TCATGGGATT TATCGTCCTT CTTGTCGCAC TGGTGGCGGT CACCGGTTGC
ACCCAGACCG CATCGCCTTC AGTACAGACC ACAACCGCAA CAACTGCTCC GGCAACTACT
GCGGTCACAA CGGTGACAAC TGCCGTTCCC ACAACGATTG CAACCACAGT ACCGGTAAAC
ACTACTGCTG AGGAAACCCT GTCCTGGGAG GCCACACCCA CCCCGGCATC CATGGTCACG
ATCATCCATC TGACGAGCGC CGGGTTCACT CCTGAAACCG ATATCGTCCT GCCGGGCACC
AGTGTCTTCT TTGCGAACAA TGACAATGTC ACCCACACGA TCGTAGGCAT CGGTAACAGC
ACCGGCACGT TCAACTCAGG TGAGATTATC CCGGGTTCAG CATTCCCGTA CACATTTGGT
ATAAAATCGG GGATCCTTTA CTATGGTCTG GCAGACAATG CCTCAGTGAT GGGGACCATT
ATCGTCCAGC CGCCTTCCGG TACAACAACG TATCACTCAG CGTAG
|
|---|
| Protein sequence | MKLLMGFIVL LVALVAVTGC TQTASPSVQT TTATTAPATT AVTTVTTAVP TTIATTVPVN
TTAEETLSWE ATPTPASMVT IIHLTSAGFT PETDIVLPGT SVFFANNDNV THTIVGIGNS
TGTFNSGEII PGSAFPYTFG IKSGILYYGL ADNASVMGTI IVQPPSGTTT YHSA
|
|---|
| |