Gene Mboo_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1479 
Symbol 
ID5409861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1522264 
End bp1523442 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content52% 
IMG OID640868714 
Producthypothetical protein 
Protein accessionYP_001404640 
Protein GI154151022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.192585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.860345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCA GCCAGCAGAT CCTGATCCTT TGTGGAATCC TTTCAATCGG GATCGTGGCA 
GTACTCGCTG GAATAATGAT GTACATGAAT GCCGGTGCCC CGACAATGAC AACTCCTGCT
GGTGGAATCC AAAAATCTCC CTCGGGATAC GATCTTTCGC TGTTAACGGT TGATGTGCCT
TCAGGGGAGC CTCTTGGAAA CGTTTCTGTG TACCTCGATG GCGGATACGA CGGTTCTACA
TCCGATCAGG GAACAACGGG GATCCTGGAA CTCGGCCCGG TATCAAAAGG CCGGCATACC
ATCCGGGTAT CAAAATCCGG ATACCTGGAT TATACGCAAA GCGTGGTTGT CCCATCCGAT
TCACCGGTCA GGATCGGACT GCAGTCCCAA CTGCTCGTTC CCATTCAGGT AGCCGGCTCC
CATGATACGA AGATCGATAT CGTGTTTATC CCCTCGGGGA CTACGTACGA TTATGCTGAC
CAGGAAAAAA TTACTACAAC TCCGTATGTC ACGAACAGAA GTGCATTCGT AACGGATGTC
AACGGGATCG TTAATGAGTC ACTTTTCACC CTTGACACGG TTACCGATAC AACTAACCCT
ATCCCCTCCG ACTACCGGAA CCGGTTCAAT ATCTATTATT ATTATGACTC GTCACAGTTC
GCAGACGCCT TTGACGGGTG CTCAGGGAGT GTTCCGGATA CATTCTGGGA AACGGTACCC
TTTGCGGATG TCGTCATAAT CCTGTATCCC CCCTATTCAG CCACGGATGC CGGTACATCG
GACGAGCCGG AGGGCTGTGT CAATCACGGC TCAGGCAGGA GCTGGATGAA AACCCCTGAC
AACCAGAACG TCCTCTTCCA GCATGAGATC GGTCATGCGA TCTTCGGCCT TGTCGACACC
TACTGCGGCG ACACATTGTA TTGGCAGAAC GATCCTCATC CGAATGTGTG GTCGTCACAG
GAGAGCTGTG TAGCGGATGC AATAAACAAT TCCTGGGACC CTTCAGCATG CCGGCAGATC
GAGGCTGCGG ATCCGGCGTC CTGTACAAAG CCATTCTGGC GATGGGACCC CGATCCGGAT
ATTATGCACG AAGGGTACAG CGGGACGTTC GGGAAGGCCT CAACCCAGCG GATGACGTAT
GTCTTCAATA ATATCAATAT CTGGGGGACA GCTGCATGA
 
Protein sequence
MNRSQQILIL CGILSIGIVA VLAGIMMYMN AGAPTMTTPA GGIQKSPSGY DLSLLTVDVP 
SGEPLGNVSV YLDGGYDGST SDQGTTGILE LGPVSKGRHT IRVSKSGYLD YTQSVVVPSD
SPVRIGLQSQ LLVPIQVAGS HDTKIDIVFI PSGTTYDYAD QEKITTTPYV TNRSAFVTDV
NGIVNESLFT LDTVTDTTNP IPSDYRNRFN IYYYYDSSQF ADAFDGCSGS VPDTFWETVP
FADVVIILYP PYSATDAGTS DEPEGCVNHG SGRSWMKTPD NQNVLFQHEI GHAIFGLVDT
YCGDTLYWQN DPHPNVWSSQ ESCVADAINN SWDPSACRQI EAADPASCTK PFWRWDPDPD
IMHEGYSGTF GKASTQRMTY VFNNINIWGT AA