| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1455 |
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| Symbol | |
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| ID | 5411400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1492137 |
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| End bp | 1493741 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640868690 |
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| Product | CHAD domain-containing protein |
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| Protein accession | YP_001404616 |
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| Protein GI | 154150998 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5607] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.365733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.116656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACC CTGAGCCGGC AACAATCACA ACCGGTCCCT GTACATTCGG AGCGGGCCAG
CTCCTGCCTC TTATCGATGT ACTAACCGCC GAGATCGCGG GGGTCCGGGC CGATGACGAC
ATCGAACATG TCCACCGAAT GCGGGTCGCT TCCCGCCGGC TCCGCGCCGC GCTTCCCCTT
TTTGCCGAGT GTTTTCCCGA AAAGGAGTAC CGGTTCTGGT CAAAAGAAAT AAGAAACATT
ACCCGTGAAC TGGGTGCAGC ACGGGACACA GACGTTCAGA TCGCGTTTTT GAAAAAATAT
CTCAAGACCT TGACCGGCTC GCAAAGGCCT GTACCGGGAC CAGACACGGC AGCACATGAG
GGTGACCCGG TCGCGGCACA CCTGATCCGG CTCCAGAAAC AGCGTGGTAC TCTTCAGAAA
AAAGTGGTGA CAGCCCTGGA TGAGCTGGAC CACTCCCGGA TGCTCCCCGC TCTCCGGGCG
GCCTGTACCC TTCCCGAAGA ACGTGCAAAA CAAAGAAAGC GGGAACGCTT TGCCGGCATC
CTCCCGGTTG CCGCCGGGCG GATGGGAAAG CGCCTGCAGG CCATCTCCCG GTACGAACCT
TATGTCCACA ATCCTGATGC GGTCTTTGAG CATCATGCGC TGCGCATCGC GGCAAAGAAA
CTCCGGTATA CTCTCGAAGC ATATGCTCCT CTCTACCGGC GCGACTTAAA AAAACCGATT
GCCCGGATAA AACGTCTCCA GGATCTCCTG GGAGACATCC ATGACTGCGA TGTCTGGATC
GAACAGGTCT CGCTTGCGAT TGTAAAGCAG CGTGCCCGAC GCCATCCACA TGATGGCTCA
TCCGCTGCTG CAATCTCGGC CATTGCCCCA TTGCGGAGAC TGCTCTCCAA CCGGGAAAAG
CGGAGAAGCC GGTTGTACCG GATCTTTGTC CGGTACTGGG ATGCTCTATT AAGGACCGGC
TTCTGGGAAA ACCTTGCATC AACAGCTCTT TGCGGGCAGC GTTCAACATT CTGCCATCAC
GGCACGCTTC CGGTAAAAGA GGAACAGGGG GCATTTTACC GCCTTGCTGC TACAGCCCCC
GATCATGAAG ACCACAGCCG GATTGTTACG AGGCTTGCGC TCCGCCTCTT TGACGAACTT
GCTCCGGTCC ACGGGCTTGT TCGGAGAGAC CGCACCCTCC TTTCTTATGC CGCCACAGTG
CACGATATCG GCTGGATCCG CGGGCAGGAA GGTCACCAGA AGGAGAGTGC AGCAATAATC
CTTGCCTCGC CAGCTCTCCC GGTCCCGGTA CGGGAACAGG GTATGATCGC CGTGATCGCC
GGGCTCCATA GCGGGAAGCC TGATGCCCGG CCCGAGGGAT TTTTTACCCT CCTTACCCCG
GTTGACCAAA AAAAAGTGCG CACCCTTGCC GCCATCCTTC GGGTGGCTGA CGGGCTCGAT
TACCTCCATG CGGGAAACGT GACTGATCTT ACCTGTACAG TACGGACTTC CGATATTCTT
TGTACCATCA CCGGTACCGG GGATCTCTCG GCAGAAAAGG GCAGGGCAAT GCGCAAGAGC
GACATGTTCC TGGAAGTATT CGGTAAACCG CTGGTGATCG CATGA
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| Protein sequence | MSDPEPATIT TGPCTFGAGQ LLPLIDVLTA EIAGVRADDD IEHVHRMRVA SRRLRAALPL
FAECFPEKEY RFWSKEIRNI TRELGAARDT DVQIAFLKKY LKTLTGSQRP VPGPDTAAHE
GDPVAAHLIR LQKQRGTLQK KVVTALDELD HSRMLPALRA ACTLPEERAK QRKRERFAGI
LPVAAGRMGK RLQAISRYEP YVHNPDAVFE HHALRIAAKK LRYTLEAYAP LYRRDLKKPI
ARIKRLQDLL GDIHDCDVWI EQVSLAIVKQ RARRHPHDGS SAAAISAIAP LRRLLSNREK
RRSRLYRIFV RYWDALLRTG FWENLASTAL CGQRSTFCHH GTLPVKEEQG AFYRLAATAP
DHEDHSRIVT RLALRLFDEL APVHGLVRRD RTLLSYAATV HDIGWIRGQE GHQKESAAII
LASPALPVPV REQGMIAVIA GLHSGKPDAR PEGFFTLLTP VDQKKVRTLA AILRVADGLD
YLHAGNVTDL TCTVRTSDIL CTITGTGDLS AEKGRAMRKS DMFLEVFGKP LVIA
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