| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1451 |
|---|
| Symbol | |
|---|
| ID | 5411396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1487177 |
|---|
| End bp | 1488256 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640868686 |
|---|
| Product | GHMP kinase |
|---|
| Protein accession | YP_001404612 |
|---|
| Protein GI | 154150994 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1907] Predicted archaeal sugar kinases |
|---|
| TIGRFAM ID | [TIGR00144] beta-RFAP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0518145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0558976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTGA TGATGATACG CGGCGGCGAC TTGGATCTCG TGGAGTATGA CTTCCGGACA
TTCCTCCCCG GCGAGATCCC AAAGACGCTC GGCCTGGAGA AGAACAACTA CCGGCTCCGG
CCAAAGAAGG GAAAGATCGT GGTAAAGGCC CCGGCCCGGA TCCATCTCTC GGTTCTTGAC
ATGAACCGGT TTGCCCCGGA TCATGCTGGT GGCGGAGGGA TCGGTTTTGC GATCCAGTGC
TACTGCACCG CCGAAGTGGA ATGTACCCGC CAGGGTCTTT TGATTGATTA CAACCGGTCG
GTTATTATCG AGAACTTTGT TGCGGTCTTT AACAAGGCCG TCGGGTATAC CGGCGGGTTT
AAGATCAAGG CAACAGACCA TGAACGCAAG CATGTGGGCC TTGGATCTAC GAGCACGGTG
ATGATCGCTG TGGCAACCGC GTTGAATGAA GCCGTGGGAT CACCGCTTTC CAATGCAGAA
CTCCGTACCT TGATCGGTCA CAACTATGTT GAGGAAACAG CTGACGGCGC CATTGCATTT
GGTTTTGAAA CCGGCGTCGG GCCTGCGGCA AGTACGTATG GGGGGATGGC CGTGATGGGC
GATGAGCTGG TGCTTGTGTA CCACCATGCC TTTGCTGAGG GCAAGAATGT CTTTATCGTG
GTTCCGCCCA CGGATATCTC CTCTGCCGGC ACAAAGGAGT TTGATCTCCT CATGAACCGG
GCGCGGACGC TCGATTACCG GGACCGGGAA CTCAAGGCAT ACTTCCTTTT GATGGACTTC
GTTCCCGCAC TCGAACGCAA TGATCTCAAA AAGATCGGGG ATGTCATCTG GGAGATCGAG
TTCCGCGGCT CAAAAAGGGC CGAGGTGGAG CACCACAGTT ACCGGATCTA CCAGTACATG
AGCATGCTTC GCGAAGCCGG TCTCGAATTC GTGGGCATGA GCTCTGTGGG GCCGTCAATC
GCGATCGTAA CTGATAAGAG CAGAAAGGAG ATCCAGAAGA TCCTCGCGCC GCTCGATCTC
TCAATTGCCA TTGCCACAAA GGTGGACAAT AACGGCCTCT CAGTCACGTA CGGAAAATAG
|
|---|
| Protein sequence | MPVMMIRGGD LDLVEYDFRT FLPGEIPKTL GLEKNNYRLR PKKGKIVVKA PARIHLSVLD
MNRFAPDHAG GGGIGFAIQC YCTAEVECTR QGLLIDYNRS VIIENFVAVF NKAVGYTGGF
KIKATDHERK HVGLGSTSTV MIAVATALNE AVGSPLSNAE LRTLIGHNYV EETADGAIAF
GFETGVGPAA STYGGMAVMG DELVLVYHHA FAEGKNVFIV VPPTDISSAG TKEFDLLMNR
ARTLDYRDRE LKAYFLLMDF VPALERNDLK KIGDVIWEIE FRGSKRAEVE HHSYRIYQYM
SMLREAGLEF VGMSSVGPSI AIVTDKSRKE IQKILAPLDL SIAIATKVDN NGLSVTYGK
|
|---|
| |