Gene Mboo_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1417 
Symbol 
ID5412019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1446064 
End bp1446465 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content52% 
IMG OID640868651 
Productsirohydrochlorin cobaltochelatase 
Protein accessionYP_001404578 
Protein GI154150960 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.158753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA AGGGAATGTT ACTGGTAGGC CATGGCAGCA CCATGCCCTA CAACAAGGAG 
CTCATCGAAT CCACGGCAAA GATGATCGCA GCGCAGACCC CCGAGTTTGT GGTAAAATGC
GGTTTTATGA ATATCAATAA GCCCTCGATC AAGGAATCAC TTGCCGAGTT TTCCAAAGAA
AATATCGATG CACTTGTTGT TGTCCCGCTC TTTCTTGCAA AAGGCGTCCA CATTGAAAAA
GACATCCCCG GCGAGATCGG CCTCCCTGAG GGAACCAAGA AGGGCACGTT CGGGCTCAAC
GGGAAGACCA TCCCGCTCGT GTACGCCGAT CCCATCGGGA TCGACCCGCT CCTTGCCGAG
CTGATGGTCA AGAACGCCCA CAAAGCCCTT GCACACGTCT GA
 
Protein sequence
MSKKGMLLVG HGSTMPYNKE LIESTAKMIA AQTPEFVVKC GFMNINKPSI KESLAEFSKE 
NIDALVVVPL FLAKGVHIEK DIPGEIGLPE GTKKGTFGLN GKTIPLVYAD PIGIDPLLAE
LMVKNAHKAL AHV