Gene Mboo_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1410 
Symbol 
ID5410812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1440268 
End bp1441362 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content57% 
IMG OID640868643 
Producthypothetical protein 
Protein accessionYP_001404571 
Protein GI154150953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0117304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.209488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCCTCCTTCT CTGTACCGGG ATCCTTTTTC TTATCGCCGG CGTGACGGCG 
TACCAGGTTT ACCTGTATGC CCCCTCTGAC CTTACGGTAG GCATGCCACT TGTGGTTAAC
GGCACAACGA CGTTTGGCAT CGGGACACCT ATCGATGTGG TCCTCTACCA GCAGGTGACA
ACCAGCACAG AGATCGAACG GACGGTAGCG TATGTCCAGT CGGATAACAC ATTCAGGGTG
ATCTTTGACA CGACCGATCT CACCCCGGGA ACCTACAAGG TCGAGATCCC GGCAAGCGGC
ACGGGGGACT CGATTACCAT GAGACAGGTC AGGCTTGTGG AACGCTCTGA CGAACTTTCC
CTGTCATCCC CGATAGCCCA GGCACTGCCC GGCCCCCTGC TCGTTGCCGG GCAGATCCCG
GCCGATATCA ATACCGGTGT CCAGATTATC GTAATCGAGG CGGACAACAG TATCTTCTTT
GGCCCGGCAT ATGTAGGAAC GGACAGCCAG GGCAGGTTCA ACATCTCGGT TCCGGTCAGC
CAGCCCGGGG ATTATGACGT GAGTTTTACC GATGCTGACG GGTATATCCG GACACAGACA
TTCCGGGTTA CCGGGGGATC TGCACAGGCT TCAGCGGAGA CCATCTCGCC GGTCGCTGCA
GTCTCGGCTT TAGGGATCGC ATCCCGCGAG GATCCGGTGT ACTTTACCGT GCAGCCATCA
GGAAACGGTC CCCTCACCAT CACCACTTCA GCCACTTCAG ACTGGATTGT CGAATACACG
GATGCAGACG GGAACCGGAA TACCCTTCAT GAACAGGGCG GGGCCGTTTC TCCGGATATC
GTCATTAATG ACACCGGGAC ACCCCTGTAC TTCAAGGTCT ATCCTGACAA GTACTCGGTC
ACCGACGATA TCTCAATCTC AGCCACAAAT GCAGATTCCA TCGACGTCAG CGGGAATCCA
CCGGCAGCCT TTGGGCAGGC GCAGCTGCCT TCCCAGCAGG TACCGGTAAC GCAGTCCCCG
CTTGGGGCAG AAACAGGAAT CGCTGCGGCG GGGATCGCCA TGCTGTGTCT CCATTTCCTT
GTACGCAGAC CATAA
 
Protein sequence
MKKILLLCTG ILFLIAGVTA YQVYLYAPSD LTVGMPLVVN GTTTFGIGTP IDVVLYQQVT 
TSTEIERTVA YVQSDNTFRV IFDTTDLTPG TYKVEIPASG TGDSITMRQV RLVERSDELS
LSSPIAQALP GPLLVAGQIP ADINTGVQII VIEADNSIFF GPAYVGTDSQ GRFNISVPVS
QPGDYDVSFT DADGYIRTQT FRVTGGSAQA SAETISPVAA VSALGIASRE DPVYFTVQPS
GNGPLTITTS ATSDWIVEYT DADGNRNTLH EQGGAVSPDI VINDTGTPLY FKVYPDKYSV
TDDISISATN ADSIDVSGNP PAAFGQAQLP SQQVPVTQSP LGAETGIAAA GIAMLCLHFL
VRRP