Gene Mboo_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1362 
Symbol 
ID5410608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1388385 
End bp1389812 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content60% 
IMG OID640868594 
Producthypothetical protein 
Protein accessionYP_001404523 
Protein GI154150905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.431827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.206407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAT CGTCCGAAAT ACGCACCACT ATCATTTCCA CCCTTACGGC ATCCAGCCGG 
CCGGTCTCCA TTGCCGGCCT AGCAAGGAAG ACCGGCATCT CGCGGAACAC ACTCTCGAAA
TACCTTGAGA GAATGGTGAT GAGCGGCAGC GTGGGGATGA TCCATCACGG GATGGCAAAG
AAATTTTATC TCCGTGCACC GGGAGAGTCC GCTCCCGCGG GAACGGAGAC CCAGGACCTC
ATTCTCGTCC TGGACCTGTC CTGCTCGGTG CTTGTTTTTG ATAAGATCGA ACGAAAAGAG
GCAATCTCCA GCCTTGGCCC GGAACGTACA GAAGAGATCC CCTTCTCCCG GGATATCGCA
GAGATCTTAG AGTCCGGGCC GTTCCTGCAG TGGATCTCCC GCATACAATT TTCCCCGGGA
TCACAGCAAT CCCTGTACGA GATCCGGAAA ACGGACAAGA GCGCCGGCGC CATGACACTT
GCCTACCGGG CGTTTCCCCT CTTTTTTGCA GGGAGGGAAC CGCTGGTGGT GCTCTACACC
ACACGATCCC CGGAGAGGGA TCCCGCAGGC TCCCGGGATT CCCCCCGGTT TTCGCCGGAG
GACACCCTTA TTGCCGAGAG CGACTGCGTG GTCATCATCC AGGATATGCA TATTATCCAC
GCGAGCCCCT CGTTTGCGCG GCTGATCGGA CGGCCGATCA ACTCGATCCG GGGGTACAAC
ATCAAGAGGT TCTTCCAGGC ATCATCCCTG ACTGCCCTGG AGACCTCTCT TTCTGCGCTG
GAAAAGGAGA GCCGTGCGGC TCCTTCCCCG CTGACGCTTA CCCTGACCGG AAACGGGGAA
GAGACTGCCG GGGACTATGC ATTCCACCTG AGCCGGATGC CGTACCCGGA TTCCGGGGCA
ATGATCGGGG TGCTGCACAG GACCGGGCCG CAAAAGGAGG CCGCCCGGCC GGTACACGTG
GTCCCTTCGG GATGGGAGAG TTTCCTGCGG GAACTTCTGA CCCGGCTCCA GATCCGCGAA
CGGGAAGCAA GCGCTATCCT TGTCCCCTGG GCTCTCGAAC AACTGCACCC GCTGCTTGAC
GCTGACGAAT GTGTCCTAAA TATCCGGATC CGGGAGATGG GGGATTTTTC CCGCACGTAC
CGTTGGAGCA TGCGTAAGCC CGGCACGGAC GAAGGGGCAG AAGGGAGCGA CAGCGCAGAG
ACGGGCATGG ACGAACTGCT GCAGGTCCCG ATCCGGAAAA ACAAAAAGAC CCTAGGCGGG
TTTGGCTGGC ACCCCCGGTC GCCGGATATG ATACCCCCGA TCGACCGGCA ATCCCTTGAA
ACGGTCTGCA CGCTCCTTGC CCTCAAGGTC TGGCACCAGG CATGCATCGA GCGGGCAATG
GAGAGCCAGG CCGGATTCAA CGACGTATTT GGCGAGATCT CCCTGTAG
 
Protein sequence
MPGSSEIRTT IISTLTASSR PVSIAGLARK TGISRNTLSK YLERMVMSGS VGMIHHGMAK 
KFYLRAPGES APAGTETQDL ILVLDLSCSV LVFDKIERKE AISSLGPERT EEIPFSRDIA
EILESGPFLQ WISRIQFSPG SQQSLYEIRK TDKSAGAMTL AYRAFPLFFA GREPLVVLYT
TRSPERDPAG SRDSPRFSPE DTLIAESDCV VIIQDMHIIH ASPSFARLIG RPINSIRGYN
IKRFFQASSL TALETSLSAL EKESRAAPSP LTLTLTGNGE ETAGDYAFHL SRMPYPDSGA
MIGVLHRTGP QKEAARPVHV VPSGWESFLR ELLTRLQIRE REASAILVPW ALEQLHPLLD
ADECVLNIRI REMGDFSRTY RWSMRKPGTD EGAEGSDSAE TGMDELLQVP IRKNKKTLGG
FGWHPRSPDM IPPIDRQSLE TVCTLLALKV WHQACIERAM ESQAGFNDVF GEISL