Gene Mboo_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1347 
Symbol 
ID5410283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1373790 
End bp1374410 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID640868579 
Productflagellin 
Protein accessionYP_001404508 
Protein GI154150890 
COG category[N] Cell motility 
COG ID[COG1681] Archaeal flagellins 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.320547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.210099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA AAGTACGTTA TTGGGATGAT GAAGGATTCA CCGGCCTTGA GGCAGCGATT 
GTGCTGATTG CATTCGTTGT TGTTGCAGCA GCATTTTCAT ATGTAGTACT CGGCGCCGGG
TTCTTCACGA CGCAGAAGGC ACAGCAGACT GTCCACACCA GTGTTGAACA GTCCAGTTCG
ACTCTGGAGA TTGTAGGCAA TGTGTATGGT ACAAATTCCG GTGCAACCGG AGCTTCAGGA
GATACGATTA ATTTTGTCAA CTTTAGCATG GCCTTAGCTC CCGGCGGAAC TCCCATTGAC
TTTTCAAAAG TGGTTCTGAT TTACAGTAAT GAAACCCAAG TCGTTACCCT GATAAACTCA
ACAAGTCTGA TTCCACCTAC AGAACCAGCG ACTACTGGTG GTGTTAAAAA CACCTGGTCA
GTTAATAGTG TTCAAAATAG CCCGTCGAGT ACCGCATCCT TGTTGCTCCA GCCAAACGAG
CAGTTCGGCA TTAGCTGCTA TGTCCCTGGC ATTCCCGCAA ACGATCAGTT TACCATTGAG
GTCAGGCCAT CAATTGGAGC TGCCTTTAGT ATAACACGGA CCGCTCCCGC CGCTGTAGAT
GCGGTGAACA TCCTCTATTA A
 
Protein sequence
MNEKVRYWDD EGFTGLEAAI VLIAFVVVAA AFSYVVLGAG FFTTQKAQQT VHTSVEQSSS 
TLEIVGNVYG TNSGATGASG DTINFVNFSM ALAPGGTPID FSKVVLIYSN ETQVVTLINS
TSLIPPTEPA TTGGVKNTWS VNSVQNSPSS TASLLLQPNE QFGISCYVPG IPANDQFTIE
VRPSIGAAFS ITRTAPAAVD AVNILY