Gene Mboo_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1339 
Symbol 
ID5411606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1365072 
End bp1365881 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content51% 
IMG OID640868571 
Producthypothetical protein 
Protein accessionYP_001404500 
Protein GI154150882 
COG category[S] Function unknown 
COG ID[COG2469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.435415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG TCCCCCTGAA AGTTGAACAT GACGGAAAAT GGGTCGTTGT CAAAGCTGCC 
GTTGGCGAAG ACCGGATCAC GCTTCCCGCA CCGGTAGATA AGGAGATCCT TTTTAAATCG
ATCTTTGATC TGGAAGAAAA AAAGAGTGTT CTTGTACTGA CGGTCAAGGG AAACCCTGAT
GCGATCATAC GGATCGCAAG CGTGGAAAAG GTTCTCATTG TCCTCAAGCG CCTGATCCTT
GCCAGCTGTA ATGCGTATCG GCTCATGGCG TATTTCATGT CACCGGCAAT ACGGGGAGGC
GTGCTTGCCA AGAATGCCCA GTGGGAGAAA GGCAGCATCG TTGTGGTCAA GAGCGGGATC
TGGTTTGCAA GCGCTGCAAA ACAGATCTGC GTCCCGCTTC CCGATGTAGC TGCGATCGAG
CTGACCAAAA GGGATGTCCA GGGCAAGCAG ACAGATGTGG TCCGGATCGA TCATGTGGAA
TCCGGTGAGG TTGTCTCAAG CCTTGTCCTT TGTCCTCTTT CCACCCTGCA GGTACTTGCA
AACTTCCTCA AGGATGCCAC TAAGGGAATC GATATGGCGG GCACGGAGCT TGATGCGATT
GACCAGCAGG TAGCCATGCT CGTATATTCC GGGATGGACT CCCATGCAAT TGAGAACATG
CTCAATATCC CCCATAAGCA ACTCGATGAG ATCTACGACC GGATAATCAA GCTCGGCATT
GCCGAAGTGA CCATTATACG GCGTGAGGTC CAGCTCACCA CCAAAGGGGT CCGTTACATC
TCTGATGCCA CAAAGACCCA GACAAATTAA
 
Protein sequence
MTEVPLKVEH DGKWVVVKAA VGEDRITLPA PVDKEILFKS IFDLEEKKSV LVLTVKGNPD 
AIIRIASVEK VLIVLKRLIL ASCNAYRLMA YFMSPAIRGG VLAKNAQWEK GSIVVVKSGI
WFASAAKQIC VPLPDVAAIE LTKRDVQGKQ TDVVRIDHVE SGEVVSSLVL CPLSTLQVLA
NFLKDATKGI DMAGTELDAI DQQVAMLVYS GMDSHAIENM LNIPHKQLDE IYDRIIKLGI
AEVTIIRREV QLTTKGVRYI SDATKTQTN