| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1316 |
|---|
| Symbol | |
|---|
| ID | 5411961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1342419 |
|---|
| End bp | 1342736 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640868548 |
|---|
| Product | pyridine nucleotide transhydrogenase subunit alpha |
|---|
| Protein accession | YP_001404477 |
|---|
| Protein GI | 154150859 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.479492 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACA CCACCATGCT CTGGACCGCG ATCTACATCG TGATGCTGGC GGCCTTTGCC
GGCTATGTCA TTATCAGCAG AGTCCCCGCA CTCCTCCACA CGCCGCTCAT GAGCGGTTCG
AACTTTATCC ACGGTATCGT CCTTGTGGGT GCGATGGTCG CACTCGGCCT TGCCACAACC
CCGCTCGAAC AGCTTATCGG TTTTATTGCA GTCATACTCG GGGCTGCAAA CGTAACTGGC
GGCTACGTGG TGACCGAGCG GATCCTCCAG ATGTTTGACC GCTCGAACAA GAAACCTAAA
GAGGAGGCAA GGAAATGA
|
|---|
| Protein sequence | MIDTTMLWTA IYIVMLAAFA GYVIISRVPA LLHTPLMSGS NFIHGIVLVG AMVALGLATT
PLEQLIGFIA VILGAANVTG GYVVTERILQ MFDRSNKKPK EEARK
|
|---|
| |