Gene Mboo_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1274 
Symbol 
ID5410294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1297844 
End bp1298560 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID640868502 
Producthypothetical protein 
Protein accessionYP_001404435 
Protein GI154150817 
COG category[S] Function unknown 
COG ID[COG2122] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.714961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.29978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG AACCGTTCCG GTACCGGGAG ACATTTGCCG CGATCCTCGC GGATACCCCG 
GCACATGCGG ATGCGGCAAA GAGAGGAATG ATCGCCGCCC GGCAGGTGCT TGAATGCTAC
ATTGCCCGGG ATCCTTTTTT TGCAAGCACC TTTTTTCCCT ACGAGCCGGA AACCGATGAG
ACCCTGATCT GCCACATGGC AAATGCTGCG GCACATGCCG GTGTCGGACC CATGGCAACG
GTTGCGGGGG CGATTGCCGC GGCCGGCATC AATGCCATGA TGGATGCAGG GGCAACTTTT
GGCGTGATCG ATAATGGCGG CGATATTGCC CTTGTCAGCG ACCGGGACGT CCGGGTGGGA
GTGCATGCGG GGTCTGCCCC GGTCTCGGAC AGGATTGCTT TTATTGTGCC GCCACAGGAG
CAGCACTCCT ATGGCATCTG CACCTCATCG GCCACGGTCG GCCCGTCCAT CTCGTTTGGG
ATGGCAGACG CAGTCACGAT CTTTGCCCGC GATCCTCTCG ATGCCGATGC ATGGGCCACT
GCCGTCTGCA ACCGGATCCG GCCGGATGAC CATCGTGTGC TTGAAACGAT CGATCCTTCC
CGGGTGGACG GGGTGTATGC TATCATGGGA GAATCTGTGG TCTCGTGGGG GAAGGTACCA
CCGGTGGTTC CCGCCCGGGT CGATGAGCAG CTGATCGCTG CAGGCGACCG GTTATAA
 
Protein sequence
MIREPFRYRE TFAAILADTP AHADAAKRGM IAARQVLECY IARDPFFAST FFPYEPETDE 
TLICHMANAA AHAGVGPMAT VAGAIAAAGI NAMMDAGATF GVIDNGGDIA LVSDRDVRVG
VHAGSAPVSD RIAFIVPPQE QHSYGICTSS ATVGPSISFG MADAVTIFAR DPLDADAWAT
AVCNRIRPDD HRVLETIDPS RVDGVYAIMG ESVVSWGKVP PVVPARVDEQ LIAAGDRL