Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1274 |
Symbol | |
ID | 5410294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1297844 |
End bp | 1298560 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640868502 |
Product | hypothetical protein |
Protein accession | YP_001404435 |
Protein GI | 154150817 |
COG category | [S] Function unknown |
COG ID | [COG2122] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.714961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.29978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCG AACCGTTCCG GTACCGGGAG ACATTTGCCG CGATCCTCGC GGATACCCCG GCACATGCGG ATGCGGCAAA GAGAGGAATG ATCGCCGCCC GGCAGGTGCT TGAATGCTAC ATTGCCCGGG ATCCTTTTTT TGCAAGCACC TTTTTTCCCT ACGAGCCGGA AACCGATGAG ACCCTGATCT GCCACATGGC AAATGCTGCG GCACATGCCG GTGTCGGACC CATGGCAACG GTTGCGGGGG CGATTGCCGC GGCCGGCATC AATGCCATGA TGGATGCAGG GGCAACTTTT GGCGTGATCG ATAATGGCGG CGATATTGCC CTTGTCAGCG ACCGGGACGT CCGGGTGGGA GTGCATGCGG GGTCTGCCCC GGTCTCGGAC AGGATTGCTT TTATTGTGCC GCCACAGGAG CAGCACTCCT ATGGCATCTG CACCTCATCG GCCACGGTCG GCCCGTCCAT CTCGTTTGGG ATGGCAGACG CAGTCACGAT CTTTGCCCGC GATCCTCTCG ATGCCGATGC ATGGGCCACT GCCGTCTGCA ACCGGATCCG GCCGGATGAC CATCGTGTGC TTGAAACGAT CGATCCTTCC CGGGTGGACG GGGTGTATGC TATCATGGGA GAATCTGTGG TCTCGTGGGG GAAGGTACCA CCGGTGGTTC CCGCCCGGGT CGATGAGCAG CTGATCGCTG CAGGCGACCG GTTATAA
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Protein sequence | MIREPFRYRE TFAAILADTP AHADAAKRGM IAARQVLECY IARDPFFAST FFPYEPETDE TLICHMANAA AHAGVGPMAT VAGAIAAAGI NAMMDAGATF GVIDNGGDIA LVSDRDVRVG VHAGSAPVSD RIAFIVPPQE QHSYGICTSS ATVGPSISFG MADAVTIFAR DPLDADAWAT AVCNRIRPDD HRVLETIDPS RVDGVYAIMG ESVVSWGKVP PVVPARVDEQ LIAAGDRL
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