Gene Mboo_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1265 
Symbol 
ID5410352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1288821 
End bp1289654 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content55% 
IMG OID640868493 
Producthypothetical protein 
Protein accessionYP_001404426 
Protein GI154150808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.350914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TTCTGTGTAC TCTCATCCTG CTCTCCTGCT TTCTCGTGGG ATCGGTATCT 
GCATATGGCA TATACCTGAA CTGCACGCCG CTCACCCTCC CGGTCGGCCA GACCCTCAAG
TGCGCTGTTA ATTCGGATTT TCCGCCGGGC ACCAGTTTCA GCCTGAACTT CTACCAGAAG
CAGTATACAG CAACCCTGAT TTCCAGCCAG ACAATGACCA TCCAGCCAAG CCAGACTACC
CAGTACGCCC TCTTTGACAC CACCGGGCTT AAAGGAGGCC AGTATGATGT AGAGGTCGCA
TGGAACGGCA ATGTACCGGC AATGCGTTCG GATTCTATTT CCGCCCAGCT TGTCCAGCTT
ACCGATCGCT CGGGCGAGAT CACGATGACA TCTGCCACCA CCCAGGATCT TGCTGACGCG
CTGGTGATCG CGGGAACCCT CAAGAATGGC GGGAACAGCG GTATCCAGAT CCAGGTGGAT
GGTGCCTCCG CGGGGCGGGT CTTTGGCCCG CAGTATATCC CGACCACAAA TAATATCCAG
ACCGGCGATG GCTCCTTCTC ACAGACGGTA GCTGTAACCC AGCCGGATAA TTATACCGTT
AAGTTCTCCG ATACAAACGG GGTTATCACA TCTGTTGTCT TCCAGGTCAC TGCCCCTACA
ACCGCAACCA CGATCCCCAC GGTATCCACT CCTGTACCCA CCCCGTCAAC CCCCCAGGTA
ACCTATACCC CTATCCTGAA ACCCACAACT GCAAAATCCC CCCTGCCCGT ACCCCTTATT
ATCGGGGCAC TGGGAATCGG AGTCCTGTTC GCAGTCAGGA GAGAAAAAGA ATAA
 
Protein sequence
MKKFLCTLIL LSCFLVGSVS AYGIYLNCTP LTLPVGQTLK CAVNSDFPPG TSFSLNFYQK 
QYTATLISSQ TMTIQPSQTT QYALFDTTGL KGGQYDVEVA WNGNVPAMRS DSISAQLVQL
TDRSGEITMT SATTQDLADA LVIAGTLKNG GNSGIQIQVD GASAGRVFGP QYIPTTNNIQ
TGDGSFSQTV AVTQPDNYTV KFSDTNGVIT SVVFQVTAPT TATTIPTVST PVPTPSTPQV
TYTPILKPTT AKSPLPVPLI IGALGIGVLF AVRREKE