Gene Mboo_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1247 
Symbol 
ID5412076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1268470 
End bp1269075 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID640868475 
Productputative CheW protein 
Protein accessionYP_001404408 
Protein GI154150790 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGA CATCAGAAAA CGGTAGTGGG GGATCTCTCT CCCCTTCCGC AATCCGGTCG 
CGGGCCGAGG CGTTACGGCG GGGAACAAGC GGCGCAGGAG CAAACACAGT CCAGGTCGTG
GAGTTCCTGC TGGGTAAAGA GCACTTTGCC GTGGATCTCT TCAATGTCCG GGAAGTAGTC
GAATACAAGA CTATTACCCA GCTGCCGGAT ACACCGGCCT ACATCAAGGG AATCATCGAT
CTTCGTGGGG AGATCACCAC CATCATCGAC CTAAAAGAAC GGCTCAATAT TCCGCGCAAG
GAGGGTGCAA GCGATGAGAA CTGCAGGATT ATTGTCCTTG ATGACAGCAT CACCCGGTCC
AAGACCGGCA TTATGGTTGA CAATGTTTCA TCAGTCACCA CGTTCGACCA GTCCGCAGTA
GATACGAGCA CCTCCTCAGT GGAACAGAAC AACTCCGCAA TTATTGGTAT CATCAAGAAA
CGTGTCAGAA TCAAGGACCG CGATGCAAAC GAGCTCCTCA TCCTGATTGA CATAAAACGC
CTGGTCTCGG ATAACGAGGT CGGGATAGAT CTTGCCAGTA CCGCCCCGGA AGAGATTGCG
GCATAA
 
Protein sequence
MTKTSENGSG GSLSPSAIRS RAEALRRGTS GAGANTVQVV EFLLGKEHFA VDLFNVREVV 
EYKTITQLPD TPAYIKGIID LRGEITTIID LKERLNIPRK EGASDENCRI IVLDDSITRS
KTGIMVDNVS SVTTFDQSAV DTSTSSVEQN NSAIIGIIKK RVRIKDRDAN ELLILIDIKR
LVSDNEVGID LASTAPEEIA A